EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.460e-19
Identity = 68/235 (28.94%), Postives = 112/235 (47.66%), Query Frame = 3
Query:   15 SLMSTAMVEDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATF 719
            S+MS   V+     DD ++ +      R  R L+ ++R+L+ + +R   EL   + ++          +Q P   G ++E+L+   ED A                  +++        + +   +D  KL+PG  V +++ +  +++ LP+  D  V   EV E+P   YNDIGGL+KQ+ EL EAI LP+ H E F ++G+ PPKGVL       G+      L H+   ATF
Sbjct:    2 SVMSGDEVQFQGDYDDYITYLK-----RRIRQLELQVRMLEADKERLERELSRLRSEMSRL-------RQPPAFAGTVIEVLD---EDRA------------------IVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHE-VNATF 202          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.460e-19
Identity = 56/188 (29.79%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVL 692
            +++EE       L   +EK +E++ K+   +  P  VGN+ E+++ N                       ++ +S     ++ ++  VD D+L+PG  + ++     ++  L  E D  V  M+V++ P E Y DIGGLE QI E+ EA+ LP+TH E +  +G++PPKGV+      YGE   G  L
Sbjct:   76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENH---------------------AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVI-----LYGEPGTGKTL 237          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.460e-19
Identity = 56/188 (29.79%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVL 692
            +++EE       L   +EK +E++ K+   +  P  VGN+ E+++ N                       ++ +S     ++ ++  VD D+L+PG  + ++     ++  L  E D  V  M+V++ P E Y DIGGLE QI E+ EA+ LP+TH E +  +G++PPKGV+      YGE   G  L
Sbjct:   76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENH---------------------AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVI-----LYGEPGTGKTL 237          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.105e-18
Identity = 52/210 (24.76%), Postives = 102/210 (48.57%), Query Frame = 3
Query:   84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713
            DD+    + L  ++  ++ + +    EL + + +    QE++K  + +P ++G  +E+++ N                       ++ ++T    ++ ++  ++ + LKP   VG+++ S  ++D LP E DS +  +   EKP   YNDIGG + Q  E+ EA+ LP+TH E + ++G+ PP+GVL       G+      + H    A
Sbjct:   33 DDLYARLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNN---------------------AIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAA 221          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.443e-18
Identity = 71/260 (27.31%), Postives = 125/260 (48.08%), Query Frame = 3
Query:   60 DQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            D +   ++ D ++  RLL+ +I+ L+ E++    EL+ YK ++++           P L+  +V  L++ P+                    V++++S+   + + +   +D   +KPG  V +N+    IL+ LP + D  VK ME+ E+P   Y++IGGLE+QI EL E + LP+ + E F ++GV PPKGVL       G+      +  +   A F     A  F++ F+ +G     + R      K K P  +F
Sbjct:    6 DTIRDASSPDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATES-NAVFIHV-VASEFAQKFVGEG---ARIVRELFEMAKRKAPSIIF 232          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.443e-18
Identity = 65/226 (28.76%), Postives = 108/226 (47.79%), Query Frame = 3
Query:   54 EDDQLSSMTTDDII----RASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATF 719
            ED+       DD +    R  R L+ ++R+L+ + +R   EL   + ++          +Q P   G+++E+L+   +D A                  +++        + +   +D  KL+PG  V +++ +  I++ LP+  D  V   EV E+P   YNDIGGL+KQ+ EL EAI LP+ H E F ++G+ PPKGVL       G+      + H+   ATF
Sbjct:    3 EDEAQFHGNYDDYVTYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRL-------RQPPAFAGSVIEVLD---DDRA------------------IVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHE-VNATF 199          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.443e-18
Identity = 63/227 (27.75%), Postives = 110/227 (48.46%), Query Frame = 3
Query:   60 DQLSSMTTDDIIRASRLLDN----EIRVLKEELQRTNLELDS---------YKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQ 701
            DQL  + TD     S++L+     E R L+   Q    E D          Y+ +V++ + + +  +  P ++G +V++++ N                      V++++S      +     V+PD +KPG    +N+ S  I++ LPS +D++V  ME+ + P E Y DIGGL++QI E+ EA+ LP+   E F ++G+ PPKGVL       G+      + H+
Sbjct:   30 DQLQRIETDKQDLESQMLERISSLESRNLELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANR---------------------VIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHE 235          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.885e-18
Identity = 58/210 (27.62%), Postives = 111/210 (52.86%), Query Frame = 3
Query:   90 IIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATF 719
            ++R  R+ D+ +  L+EE    +  L  +++K +E +++++  +  P  +G + EI++   +D A                  ++ + T    ++ ++  VD + L+PG  V ++  +  I+  L  + D  V  M++D+ PTE Y+DIGGLE QI E+ E++ LP+TH E + ++G++PPKGV+       G+      + +Q   ATF
Sbjct:   59 LLRMERIKDHLL--LEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIID---DDHA------------------IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ-TSATF 244          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.462e-18
Identity = 62/206 (30.10%), Postives = 105/206 (50.97%), Query Frame = 3
Query:   42 DSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQ-----RTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            D    D Q + M   +    + L + E +VL+ EL+     R N+++    E +K   +K+++    P ++G +                  +D  ++RK    V+K+ST     + +   V+PD + PG  V +N+ +  +++ LP E D R  AME++EKP   + DIGGL  QI ++ E + LP+ + E F K+G+ PPKGVL
Sbjct:    5 DDYSTDVQKNEMDLKEFKEKAYLAELESKVLRLELKNKDITRENVQIKKENEILKRELDKLRIP---PLILGTV------------------LDRVNERKA---VVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVL 186          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18
Identity = 62/243 (25.51%), Postives = 114/243 (46.91%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            L+ +   ++ E +    +   Y+ ++++ Q ++   K  P ++G +++++                     K   +++++S      + V   +D  KL PG  V +N+ +  I + +PS  +  V AMEV E    DY+ IGGL++QI EL EA+ LP+   ERF ++G+ PPKGVL       G+      + H +  ATF     +    K   + G+ ++L+ R      + K P  +F
Sbjct:   41 LEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVI---------------------KNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAH-RTNATFIRVVGSELVQK---YIGDGSKLV-REIFEMARKKAPSIIF 257          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PSMR_PYRHO8.460e-1928.94Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PRS4B_ARATH8.460e-1929.7926S proteasome regulatory subunit 4 homolog B OS=A... [more]
PRS4A_ARATH8.460e-1929.7926S proteasome regulatory subunit 4 homolog A OS=A... [more]
PRS6B_SOLTU1.105e-1824.7626S protease regulatory subunit 6B homolog OS=Sola... [more]
PSMR_SULSO1.443e-1827.31Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_PYRFU1.443e-1828.76Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_METB61.443e-1827.75Proteasome-activating nucleotidase OS=Methanoregul... [more]
PRS4_YEAST1.885e-1827.6226S protease regulatory subunit 4 homolog OS=Sacch... [more]
PSMR_METVS2.462e-1830.10Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METAC3.215e-1825.51Proteasome-activating nucleotidase OS=Methanosarci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
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