EY744203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18 Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644 +++EE R ++ +EK +E + K+ + P VG + EI++ N ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+ Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 223
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18 Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644 +++EE R ++ +EK +E + K+ + P VG + EI++ N ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+ Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 223
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18 Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644 +++EE R ++ +EK +E + K+ + P VG + EI++ N ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+ Sbjct: 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 223
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18 Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644 ++++E R L EK +E + K+ + P VGN+ EI++ N ++ TS ++ ++ VD D+L+PG V +N + ++ L + D V M++++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+ Sbjct: 72 MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 222
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.369e-18 Identity = 52/175 (29.71%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 120 EIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644 +I + ELQ ++++ +E+++E +++ + + +E PED G V+ + Q + + + D L+ GD V +N DS+ + L E D+R +AMEVDE P+ Y DIGGL+ Q+ E+ EA+ P+ + E+F +GV PP GVL Sbjct: 34 DIVAVNGELQAQLDDVEARREELREEVNRLQRENETLKTASLYLATVEDLPED----------------GSAVIKQHGNNQEVLTELSPRL-ADTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVL 190 HSP 2 Score: 33.8834 bits (76), Expect = 3.369e-18 Identity = 17/45 (37.78%), Postives = 28/45 (62.22%), Query Frame = 1 Query: 646 LYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780 L+GPPGTGKT+L + ++ F++ AG K F G+G+++ Sbjct: 191 LHGPPGTGKTMLAKAVANQTD-ASFIKMAGSELVRK-FIGEGSRL 233
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.378e-18 Identity = 50/168 (29.76%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 183 KVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCV--------------VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644 K K K+K L L NI+ + E P+ +E + + Q +G + ++ T ++ ++ VD D L+PG V +N ++ L E D V M++++ P+E Y DIGGLE+QI E+ E++ LP+T+ E + ++G++PPKGV+ Sbjct: 42 KCKLRYLKLKKLAHLLSLEDNILSLCE--PDKSSEGSNSQKHVVEQLRGSPLSVGTLEEFVDDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVI 207 HSP 2 Score: 30.8018 bits (68), Expect = 4.378e-18 Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1 Query: 634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780 K LYG PGTGKTLL + ++ FLR G + + G+G ++ Sbjct: 204 KGVILYGLPGTGKTLLAKAVANQT-SATFLRVVGTELIQE-YLGEGPKL 250
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18 Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3 Query: 84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713 +D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++ N ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP Y DIGG++ Q E+ EA+ LP+TH E + ++G+ PP+GVL G+ + H A Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18 Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3 Query: 84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713 +D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++ N ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP Y DIGG++ Q E+ EA+ LP+TH E + ++G+ PP+GVL G+ + H A Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18 Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3 Query: 84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713 +D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++ N ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP Y DIGG++ Q E+ EA+ LP+TH E + ++G+ PP+GVL G+ + H A Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18 Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3 Query: 84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713 +D+ + L E+ L+ + + E + K++ QE++K + +P ++G +E ++ N ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + + D+KP Y DIGG++ Q E+ EA+ LP+TH E + ++G+ PP+GVL G+ + H A Sbjct: 38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226 The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bpback to top |