EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18
Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +++EE  R   ++   +EK +E + K+   +  P  VG + EI++ N                       ++ TS     ++ ++  VD D L+PG  V +N   + ++  L  + D  V  M+V++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+
Sbjct:   73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 223          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18
Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +++EE  R   ++   +EK +E + K+   +  P  VG + EI++ N                       ++ TS     ++ ++  VD D L+PG  V +N   + ++  L  + D  V  M+V++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+
Sbjct:   73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 223          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18
Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +++EE  R   ++   +EK +E + K+   +  P  VG + EI++ N                       ++ TS     ++ ++  VD D L+PG  V +N   + ++  L  + D  V  M+V++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+
Sbjct:   73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 223          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.215e-18
Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            ++++E  R    L    EK +E + K+   +  P  VGN+ EI++ N                       ++ TS     ++ ++  VD D+L+PG  V +N   + ++  L  + D  V  M++++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+
Sbjct:   72 MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 222          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.369e-18
Identity = 52/175 (29.71%), Postives = 88/175 (50.29%), Query Frame = 3
Query:  120 EIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +I  +  ELQ    ++++ +E+++E   +++   +        +  +E  PED                G  V+ +    Q +   +   +  D L+ GD V +N DS+ +   L  E D+R +AMEVDE P+  Y DIGGL+ Q+ E+ EA+  P+ + E+F  +GV PP GVL
Sbjct:   34 DIVAVNGELQAQLDDVEARREELREEVNRLQRENETLKTASLYLATVEDLPED----------------GSAVIKQHGNNQEVLTELSPRL-ADTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVL 190          

HSP 2 Score: 33.8834 bits (76), Expect = 3.369e-18
Identity = 17/45 (37.78%), Postives = 28/45 (62.22%), Query Frame = 1
Query:  646 LYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            L+GPPGTGKT+L   +  ++    F++ AG     K F G+G+++
Sbjct:  191 LHGPPGTGKTMLAKAVANQTD-ASFIKMAGSELVRK-FIGEGSRL 233          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.378e-18
Identity = 50/168 (29.76%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  183 KVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCV--------------VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            K K    K+K    L  L  NI+ + E  P+  +E   +   +  Q +G  +              ++ T      ++ ++  VD D L+PG  V +N     ++  L  E D  V  M++++ P+E Y DIGGLE+QI E+ E++ LP+T+ E + ++G++PPKGV+
Sbjct:   42 KCKLRYLKLKKLAHLLSLEDNILSLCE--PDKSSEGSNSQKHVVEQLRGSPLSVGTLEEFVDDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVI 207          

HSP 2 Score: 30.8018 bits (68), Expect = 4.378e-18
Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   LYG PGTGKTLL   +  ++    FLR  G     + + G+G ++
Sbjct:  204 KGVILYGLPGTGKTLLAKAVANQT-SATFLRVVGTELIQE-YLGEGPKL 250          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18
Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3
Query:   84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713
            +D+    + L  E+  L+ + +    E  + K++    QE++K  + +P ++G  +E ++ N                       ++ ++T    ++ ++  +D + LKP   V ++K S  ++D LP E DS +  +  D+KP   Y DIGG++ Q  E+ EA+ LP+TH E + ++G+ PP+GVL       G+      + H    A
Sbjct:   38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18
Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3
Query:   84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713
            +D+    + L  E+  L+ + +    E  + K++    QE++K  + +P ++G  +E ++ N                       ++ ++T    ++ ++  +D + LKP   V ++K S  ++D LP E DS +  +  D+KP   Y DIGG++ Q  E+ EA+ LP+TH E + ++G+ PP+GVL       G+      + H    A
Sbjct:   38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18
Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3
Query:   84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713
            +D+    + L  E+  L+ + +    E  + K++    QE++K  + +P ++G  +E ++ N                       ++ ++T    ++ ++  +D + LKP   V ++K S  ++D LP E DS +  +  D+KP   Y DIGG++ Q  E+ EA+ LP+TH E + ++G+ PP+GVL       G+      + H    A
Sbjct:   38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.484e-18
Identity = 53/210 (25.24%), Postives = 101/210 (48.10%), Query Frame = 3
Query:   84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713
            +D+    + L  E+  L+ + +    E  + K++    QE++K  + +P ++G  +E ++ N                       ++ ++T    ++ ++  +D + LKP   V ++K S  ++D LP E DS +  +  D+KP   Y DIGG++ Q  E+ EA+ LP+TH E + ++G+ PP+GVL       G+      + H    A
Sbjct:   38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNT---------------------AIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PRS4_RAT3.215e-1829.6526S protease regulatory subunit 4 OS=Rattus norveg... [more]
PRS4_MOUSE3.215e-1829.6526S protease regulatory subunit 4 OS=Mus musculus ... [more]
PRS4_HUMAN3.215e-1829.6526S protease regulatory subunit 4 OS=Homo sapiens ... [more]
PRS4_DROME3.215e-1829.6526S protease regulatory subunit 4 OS=Drosophila me... [more]
PSMR1_HALSA3.369e-1829.71Proteasome-activating nucleotidase 1 OS=Halobacter... [more]
PRS4_ENCCU4.378e-1829.7626S protease regulatory subunit 4 homolog OS=Encep... [more]
PRS6B_RAT5.484e-1825.2426S protease regulatory subunit 6B OS=Rattus norve... [more]
PRS6B_MACFA5.484e-1825.2426S protease regulatory subunit 6B OS=Macaca fasci... [more]
PRS6B_HUMAN5.484e-1825.2426S protease regulatory subunit 6B OS=Homo sapiens... [more]
PRS6B_BOVIN5.484e-1825.2426S protease regulatory subunit 6B OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
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