EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.162e-18
Identity = 50/172 (29.07%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +++EE  R   ++   +EK +E + K+   +  P  VG + EI++ N                       ++ TS     ++ ++  VD D L+PG  V +N   + ++  L  + D  V  M++++ P E Y DIGGL+ QI E+ E++ LP+TH E + ++G++PPKGV+
Sbjct:   73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH---------------------AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVI 223          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.222e-17
Identity = 55/210 (26.19%), Postives = 99/210 (47.14%), Query Frame = 3
Query:   84 DDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKA 713
            +D+    + L  E+  L+ + +    E  + K++    QE++K  + +P ++G  +E ++ N    A   G+N                      ++ +V  +D + LKP   V ++K S  ++D LP   DS +  +  D+KP   Y DIGG++ Q  E+ EA+ LP+TH E + ++G+ PP+GVL       G+      + H    A
Sbjct:   38 EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNY---------------------YVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 226          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.222e-17
Identity = 50/185 (27.03%), Postives = 100/185 (54.05%), Query Frame = 3
Query:   90 IIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            ++++ R+ D    ++++E  +    L   +E+ +E + K+   +  P  VG++ EI+                 D Q      ++ T+     ++ ++  VD ++L+PG  V +N  ++ ++  L  + D  V  M++++ P E Y D+GGL++QI E+ EA+ LP+TH E + ++G+RPPKGV+
Sbjct:   65 LLKSERIKD--YLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEII-----------------DDQH----AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVI 226          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.248e-17
Identity = 62/234 (26.50%), Postives = 99/234 (42.31%), Query Frame = 3
Query:   39 EDSNIEDDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQ-------------------EKIKLNKQLPYLVGNIVEILEMNPE-DEAEEDGAN------------IDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            +D   +DD++  +T  DI     L          +L++T  +L   + ++KE                     ++ +L ++ P  V    +I++ N E DE   D  N             D D   +    V+         + +   V P  ++ G  VGV++  Y I   LP   D  V  M V+EKP   Y+D+GG + QI +L E + LP+   ERF  LG+ PPKG+L
Sbjct:   17 DDKKPDDDKIVPLTEGDI---QVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGDRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGIL 247          

HSP 2 Score: 33.4982 bits (75), Expect = 1.248e-17
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   LYGPPGTGKTL    +  ++    F+R  G     K + G+G +M
Sbjct:  244 KGILLYGPPGTGKTLCARAVANRTD-ATFIRVIGSELVQK-YVGEGARM 290          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.596e-17
Identity = 72/244 (29.51%), Postives = 118/244 (48.36%), Query Frame = 3
Query:   18 LMSTAMVEDSNIE---DDQLSSMTTDDIIRASRLLDNEIRVLKEELQRTNLELDSYK-EKVKENQEKIKLNKQL------PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATF 719
            + +  M E S ++   +  LS  +   + R  +L +  +R LKEE ++  LE  S + +KV+  +E  KL  +L      P +VG I++++                      GK +++K+ST     +     ++  ++ PG  V +N+ S  +++ LP+  D  V  MEV + P  DY  IGGLE QI EL E + LP+   E F K+G+ PPKGVL       G+      + + + KATF
Sbjct:    1 MQTILMAEGSGLDFTGEVPLSDFSKYLLDRVKQLEERNVR-LKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMA--------------------NGK-MIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVAN-RTKATF 221          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.596e-17
Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 3
Query:  129 VLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVL 692
            +++EE       L   ++K +E++ K+   +  P  VG++ EI+     DE+                  ++ +S     ++ ++  VD D+L+PG  + ++     ++  L  E D  V  M+V++ P E Y DIGGL+ QI E+ EA+ LP+TH E +  +G+RPPKGV+      YGE   G  L
Sbjct:   81 LMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEII-----DESH----------------AIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVI-----LYGEPGTGKTL 242          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.113e-17
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 3
Query:  378 VVGLVD---PDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            VV L D   P  ++ G  VGV+++ Y I   LP++ D  V  M+V+EKP   Y+D+GG + QI +L E +  P+ H ER+  LG+ PPKGVL
Sbjct:  124 VVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVL 215          

HSP 2 Score: 33.4982 bits (75), Expect = 2.113e-17
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   LYGPPGTGKTL    +  ++    F+R  G     K + G+G +M
Sbjct:  212 KGVLLYGPPGTGKTLCARAVANRTDAC-FIRVIGSELVQK-YVGEGARM 258          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.114e-17
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 3
Query:  399 DKLKPGDL-----VGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            DKL P D+     VGV+++ Y I   LP + D+ V  M+V+EKP   Y D+GG ++QI +L E + +P+ H E+F  LG+ PPKGVL
Sbjct:  122 DKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVL 208          

HSP 2 Score: 32.3426 bits (72), Expect = 2.114e-17
Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   +YGPPGTGKTL    +  ++    F+R  G     K + G+G +M
Sbjct:  205 KGVLMYGPPGTGKTLCARAVANRTD-AAFVRVIGSELVQK-YVGEGARM 251          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.747e-17
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 3
Query:  390 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            V P  ++ G  VGV+++ Y I   LP + D  V  M+V+EKP   Y+D+GG ++QI +L E +  P+ H ERF  LG+ PPKGVL
Sbjct:  129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVL 213          

HSP 2 Score: 31.9574 bits (71), Expect = 2.747e-17
Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   L+GPPGTGKTL    +  ++    F+R  G     K + G+G +M
Sbjct:  210 KGVLLFGPPGTGKTLCARAVANRTDAC-FIRVIGSELVQK-YVGEGARM 256          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 2.747e-17
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 3
Query:  390 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            V P  ++ G  VGV+++ Y I   LP + D  V  M+V+EKP   Y+D+GG ++QI +L E +  P+ H ERF  LG+ PPKGVL
Sbjct:  129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVL 213          

HSP 2 Score: 31.9574 bits (71), Expect = 2.747e-17
Identity = 18/49 (36.73%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   L+GPPGTGKTL    +  ++    F+R  G     K + G+G +M
Sbjct:  210 KGVLLFGPPGTGKTLCARAVANRTDAC-FIRVIGSELVQK-YVGEGARM 256          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PRS4_CHICK7.162e-1829.0726S protease regulatory subunit 4 OS=Gallus gallus... [more]
PRS6B_MOUSE1.222e-1726.1926S protease regulatory subunit 6B OS=Mus musculus... [more]
PRS4_CAEEL1.222e-1727.03Probable 26S protease regulatory subunit 4 OS=Caen... [more]
PRS7_YEAST1.248e-1726.5026S protease regulatory subunit 7 homolog OS=Sacch... [more]
PSMR_UNCMA1.596e-1729.51Proteasome-activating nucleotidase OS=Uncultured m... [more]
PRS4_ORYSJ1.596e-1729.7926S protease regulatory subunit 4 homolog OS=Oryza... [more]
PRS7_CAEEL2.113e-1743.4826S protease regulatory subunit 7 OS=Caenorhabditi... [more]
PRS7_DICDI2.114e-1744.8326S protease regulatory subunit 7 OS=Dictyostelium... [more]
PRS7_XENLA2.747e-1744.7126S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_PONAB2.747e-1744.7126S protease regulatory subunit 7 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
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