EY744203

Overview
NameEY744203
Unique NameEY744203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.581e-17
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 3
Query:  165 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDS-QRKGKCV--VLKTSTRQTIFLP-------VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            L  Y++K+ E++E          + G + E+ E   E   + + +  DL + Q  G+ V  VLK  T +   +        VVG    +D  KLKPG  V ++  +  I+  LP E D  V  M  ++     Y++IGGL +QI EL E I LP+T+ E F ++G+ PPKG L
Sbjct:    9 LQDYRKKLLEHKE----------IDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCL 171          

HSP 2 Score: 36.965 bits (84), Expect = 3.581e-17
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  619 GFVHLKECFLYGPPGTGKTLLGSCLGTK 702
            G +  K C LYGPPGTGKTLL   + ++
Sbjct:  163 GIIPPKGCLLYGPPGTGKTLLARAVASQ 190          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.642e-17
Identity = 57/210 (27.14%), Postives = 105/210 (50.00%), Query Frame = 3
Query:   90 IIRASRLLDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATF 719
            +++  R+ D+ +  ++EE  +    L    E+ +E + ++   +  P  VG + EI++   +D A                   + ++     ++ ++  VD D L+PG  V ++  +  I+  L  + D  +  M++D+ PTE Y DIGGLE QI E+ EA+ LP+TH E + ++G++PPKGV+       G+      + +Q   ATF
Sbjct:   69 LLKMQRIHDHLL--MEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGTLEEIID---DDHA-------------------IVSTAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ-TSATF 253          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 1.723e-16
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 3
Query:  390 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            V P  ++ G  VGV+++ Y I   LP + D  V  M+V+EKP   Y+D+GG ++QI +L E +  P+ H ERF  LG+ PPKGVL
Sbjct:  129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVL 213          

HSP 2 Score: 29.261 bits (64), Expect = 1.723e-16
Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCLGTKSQKLPFLRPAGPPTFPKCFFGKGNQM 780
            K   L+GPPGTGKTL    +  ++    F+   G     K + G+G +M
Sbjct:  210 KGVLLFGPPGTGKTLCARAVANRTDAC-FIPVIGSELVQK-YVGEGARM 256          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.156e-14
Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            L  ++R     L R   + +    +V+  +E+++L ++    VG +V+++  N                      V++K        + +   +D  K+ P   V +  DSY++   LPS+ D  V  M+V++ P   Y+ IGGL++QI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   43 LQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 199          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.156e-14
Identity = 57/243 (23.46%), Postives = 109/243 (44.86%), Query Frame = 3
Query:  111 LDNEIRVLKEELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVLSIWTSRYGEDFAGFVLGHQKPKATFFEARRAPNFSKMFLWKGEPNELL*RPFLTFEKGKIPPCVF 839
            ++ ++R+L+        E+++ K + + ++E++   K +P ++G  +E ++ +        G+N                       + ++  VD + LKP   V +++ S  I+  LP E DS +  M   EKP+  Y D+GGL+ Q  E+ E + LP+   + + ++G+ PP+GVL       G+      + +   KATF        F + +L +G     + R      + K P  VF
Sbjct:   16 MERKLRLLEIREGYVRKEIETLKREERHSREELDRVKSVPLIMGQFLEPIDSSTAIVGSTAGSNF---------------------VVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANH-TKATFIRV-NGSEFVQKYLGEG---PRMVRDVFRLAREKAPSIVF 232          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.678e-14
Identity = 52/150 (34.67%), Postives = 81/150 (54.00%), Query Frame = 3
Query:  198 QEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVL-KTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            Q++ +LN+++ +L   I  +         +E  +N+ +  ++ GK  VL KT+      + V   V+ D+LK G  V +  DSY +   LP++ D  V  M V++ P   Y  IGGL++QI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   94 QKRAELNRRVRFLREEISIV---------QEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVL 234          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.274e-14
Identity = 50/182 (27.47%), Postives = 89/182 (48.90%), Query Frame = 3
Query:  105 RLLDNEIRVLK--EELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            ++ D E+ +L+  + L+R   + +    +V+  +E+I+L ++    VG +++ +  N                      V++K        + +   +D  ++KP   V +  DSY ++  LP++ D  V  M V++ P   Y  +GGLEKQI E+ E I LP+ H E F  LG+  PKG+L
Sbjct:   23 KIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNK---------------------VLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGIL 183          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.274e-14
Identity = 53/181 (29.28%), Postives = 88/181 (48.62%), Query Frame = 3
Query:  111 LDNEIRVLKEE---LQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            LD   R+ +E+   L R   + +    +V+  +E+++L ++    VG +V+++  N                      V++K        + +   +D  KL P   V +  DSY++   LPS+ D  V  M+V++ P   Y+ IGGL++QI E+ E I LP+ H E F  LG+  PKGVL
Sbjct:   40 LDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 199          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4)

HSP 1 Score: 66.6254 bits (161), Expect = 1.202e-13
Identity = 54/176 (30.68%), Postives = 88/176 (50.00%), Query Frame = 3
Query:  141 ELQRTNLELDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCV--------VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            E +  N  L+ +K K+ E++   + + QL     NI ++ ++   D+ E D   +    Q  G+ +        ++K S+     + V   VD  KLK G  V ++  +  I+  LP E D  V  M   E+    ++ IGGL +QI EL E I LP+ + E F ++G++PPKGVL
Sbjct:   49 EQEAHNKALNQFKRKLLEHR---RYDDQLKQRRQNIRDLEKLY--DKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVL 219          

HSP 2 Score: 31.187 bits (69), Expect = 1.202e-13
Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  634 KECFLYGPPGTGKTLLGSCL 693
            K   LYGPPGTGKTLL   +
Sbjct:  216 KGVLLYGPPGTGKTLLAKAV 235          
BLAST of EY744203 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 1.565e-13
Identity = 49/170 (28.82%), Postives = 84/170 (49.41%), Query Frame = 3
Query:  165 LDSYKEKVKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP-------VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIPELIEAIVLPMTHKERFGKLGVRPPKGVL 644
            L+SY+ K+ E ++  +  K L      + +       D++E D  ++    Q  G+  VLK  + +   +        VVG    ++ ++LK G  V ++  +  I+  LP E D  V  M  ++     Y+D+GGL +QI EL E + LP+ + E F ++G+ PPKG L
Sbjct:   26 LNSYRRKLAECRDIEQKLKDLRKKESEMTKQF-----DKSENDIKSLQSVGQIVGE--VLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCL 188          

HSP 2 Score: 34.2686 bits (77), Expect = 1.565e-13
Identity = 14/28 (50.00%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  619 GFVHLKECFLYGPPGTGKTLLGSCLGTK 702
            G    K C L+GPPGTGKTLL   + ++
Sbjct:  180 GITPPKGCLLFGPPGTGKTLLARAVASQ 207          
The following BLAST results are available for this feature:
BLAST of EY744203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PRS10_BOVIN3.581e-1732.9526S protease regulatory subunit S10B OS=Bos taurus... [more]
PRS4_SCHPO4.642e-1727.1426S protease regulatory subunit 4 homolog OS=Schiz... [more]
PRS7_RAT1.723e-1644.7126S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS8A_ARATH2.156e-1428.0926S protease regulatory subunit 8 homolog A OS=Ara... [more]
PRS6B_ENCCU2.156e-1423.4626S protease regulatory subunit 6B homolog OS=Ence... [more]
PRS8_ENCCU3.678e-1434.6726S protease regulatory subunit 8 homolog OS=Encep... [more]
PRS8_SCHPO6.274e-1427.4726S protease regulatory subunit 8 homolog OS=Schiz... [more]
PRS8B_ARATH6.274e-1429.2826S protease regulatory subunit 8 homolog B OS=Ara... [more]
PRS10_YEAST1.202e-1330.6826S protease subunit RPT4 OS=Saccharomyces cerevis... [more]
PRS10_CAEEL1.565e-1328.82Probable 26S protease regulatory subunit S10B OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744203 ID=EY744203; Name=EY744203; organism=Citrus sinensis; type=EST; length=980bp
CAAAAAATCAATAATCACTCATGTCTACGGCCATGGTCGAAGATTCTAAC
ATCGAAGATGATCAATTGTCGTCGATGACCACGGACGATATTATCCGCGC
CTCGCGTCTACTTGATAATGAAATCCGCGTTCTCAAGGAAGAGCTGCAAA
GAACAAATCTTGAGTTGGATTCGTACAAGGAAAAGGTTAAAGAGAATCAG
GAGAAGATTAAGCTCAACAAGCAGCTTCCTTATTTGGTGGGAAACATTGT
TGAGATTTTGGAGATGAATCCTGAGGACGAGGCAGAGGAAGATGGTGCAA
ATATTGATCTTGACTCACAGAGGAAGGGTAAATGTGTAGTGTTGAAAACA
TCCACCCGTCAGACCATCTTTCTTCCAGTAGTTGGGCTTGTTGATCCTGA
TAAGTTGAAACCTGGTGATCTGGTTGGAGTGAATAAGGATAGTTACTTGA
TTTTGGACACACTGCCTTCTGAATATGATTCACGGGTGAAGGCAATGGAA
GTTGATGAGAAACCAACCGAAGATTATAATGACATTGGAGGGCTAGAGAA
GCAGATCCCAGAACTCATTGAAGCTATTGTGCTGCCAATGACACACAAAG
AGCGTTTCGGAAAGTTGGGGGTTCGTCCACCTAAAGGAGTGCTTTCTATA
TGGACCTCCCGGTACGGGGAAGACTTTGCTGGGTTCGTGCTTGGGCACCA
AAAGCCAAAAGCTACCTTTTTTGAGGCCCGCAGGGCCCCCAACTTTTCCA
AAATGTTTCTTTGGAAAGGGGAACCAAATGAACTTTTGTGAAGGCCTTTT
TTAACCTTTGAAAAGGGAAAAATCCCCCCCTGTGTTTTTTTTTCCTCACA
ATATAATTTGACCCCCTTTTTGTGAAAAAAACCGGGTTTGAAAACGGAAA
AAAAATGTGGGAAAAAAAAGGGGGGGGGGCACACAAAAAAATTTTATTTA
AAAATTTTTCCCACAAATTCTCCCCATAAA
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