EY744202

Overview
NameEY744202
Unique NameEY744202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744202 vs. ExPASy Swiss-Prot
Match: HTPG_METNO (Chaperone protein htpG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.955e-24
Identity = 73/220 (33.18%), Postives = 115/220 (52.27%), Query Frame = 2
Query:    2 EDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGDKVEKVVVSDRGCDSPCCLVTGEDGWAAQME 661
            EDLPLN+SRE LQ   +L  IR+ +  K +   +  A++ + Y  F+++F   LK GI ED+  +  +A L+R+ S+ + +  TS  DYV+RMK  Q  IY + G+  KA+ +S  +E  + +G EVL + D +D +   +L +F+GK + S T+    L     E +  E        L   +K++L D V  V  S R  +S   L     G   QM+
Sbjct:  318 EDLPLNVSREMLQATPVLARIRRAVTAKVLSELKSRAKDADGYASFWQAFGPVLKEGIWEDAEQRDDIAGLIRFRSS-AVEGWTSFADYVSRMKPNQEAIYILVGDDTKALASSAQIEGFRARGIEVLLLSDHVDAFWPERLDKFDGKPIRSITQSADDLSAFAPEGE-SEGEAADLADLVPKLKEILKDDVTDVRASQRLVESAVLLSASSGGPDLQMQ 535          
BLAST of EY744202 vs. ExPASy Swiss-Prot
Match: TRAP1_DICDI (TNF receptor-associated protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.688e-24
Identity = 73/239 (30.54%), Postives = 126/239 (52.72%), Query Frame = 2
Query:    2 EDLPLNISRETLQQNKILKVIRKNLVKKCIE-LFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHS----TKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA-TKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGDKVEKVVVSDRGCDSPCCLVTGEDGWAAQMEEESEGSGLEKQHQ 700
            ED+PLN+SRE LQ N +++ I   LVK+ ++ L  E   + E +N F   F    K GI  D   K ++++LLR+ S    T S  +  SL+ YV+RMK  Q +IY+++  ++    +SP+ E  + K  EV+++ +A+DE+ +  +  F  KK+VS  +KE  +   +  +KK +   +++ +     +  V  DKV +   + R   SP  ++  E     +M +  E     KQH+
Sbjct:  409 EDIPLNVSREHLQDNGLIQRISSVLVKRILKHLNDEAKSDPEKFNVFMTEFGGFFKEGIITDFKWKDEISKLLRFESSNGSTASKTDAVSLEQYVSRMKPEQKNIYFLSVPNRAVGLSSPYYEPFQLKDIEVIFLYNAVDEFVLTNVGHFGDKKIVSVESKEAEEFLATNQDKKTETLSQDEIDKFLSWVSTVASDKVTQAKSTTRSISSPAIIIDHESANFRRMLKMVEPG---KQHE 644          
BLAST of EY744202 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.004e-20
Identity = 52/86 (60.47%), Postives = 60/86 (69.77%), Query Frame = 2
Query:  428 KEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGDKVEKVVVSDRGCDSPCCLVTGEDGWAAQMEEESEGSGL 685
            K+F+GKKL   TKEGL +  SE+ KK  ETLK ++EGLCKVIKDVL  KVEKVVV  R  DSPC LVT E GW+A ME   +   L
Sbjct:    1 KDFDGKKLKCCTKEGLDIHHSEEAKKDFETLKAEYEGLCKVIKDVLHKKVEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQAL 86          
BLAST of EY744202 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.128e-14
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 2
Query:  317 ESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK 529
            E+K  V NS  +++L K G EV+Y ++ IDEY V QLKEFEGK LVS TKE L+L E E+EKK +E  K+K
Sbjct:  205 ETKDQVANSTIVQRLWKHGLEVIYTIEPIDEYCVQQLKEFEGKTLVSVTKEDLELPEDEEEKKKQEEGKQK 275          
The following BLAST results are available for this feature:
BLAST of EY744202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HTPG_METNO1.955e-2433.18Chaperone protein htpG OS=Methylobacterium nodulan... [more]
TRAP1_DICDI5.688e-2430.54TNF receptor-associated protein 1 homolog, mitocho... [more]
HSP90_PLAFP1.004e-2060.47Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HS904_HUMAN3.128e-1456.34Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744202 ID=EY744202; Name=EY744202; organism=Citrus sinensis; type=EST; length=880bp
CGAGGATCTCCCTCTTAACATCTCAAGAGAAACGCTCCAGCAGAACAAGA
TCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTC
CAAGAGATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATT
CTCTAAGAACCTAAAGCTTGGTATCCACGAGGACTCCACCAACAAGACCA
AGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGATGAGTTG
ACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAATGATAT
CTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTC
TTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCC
ATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCT
TGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAGATGAGA
AGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTG
ATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCG
TGGTTGTGACTCACCCTGCTGTTTGGTGACGGGTGAGGATGGATGGGCAG
CCCAAATGGAAGAGGAATCAGAAGGCTCAGGCCTTGAAAAACAACACCAG
GGCTGGGTAACTGTCCCAGCAAGAAAACCCTGGGAAATACATCCGGGAAA
CCCCCTTCTGGGAGGGAGCTTAGGGAGAAAGGCTGGAGGGGGAAAAAAAA
TGAAAAGTTTTGTGAAGGGACTTGGGCCCTTCTGGCCCTTTGAAAAACGG
GCCCCCCCCCCTTCGGGGGTTTCCCCCCTT
back to top