EY744197

Overview
NameEY744197
Unique NameEY744197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO_CALJA (Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 3
Query:  312 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQ 620
            I+S + F  +L    D  +  +  F+A WCGPCK I P    LS K+ +V   ++D+D    +   S+  +  +PTF FF+ G+KV E  GA   +L+ T+ +
Sbjct:    5 IDSKDAFQEALDAAGDKLV--VVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDD--CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO_SHEEP (Thioredoxin OS=Ovis aries GN=TXN PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  312 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            IES   F  +L    +  +  +  F+A WCGPCK I P    LS K+ +V   ++D+D    +   ++  +  +PTF FF+ G+KV+E  GA   +L+ T+ +L
Sbjct:    5 IESKYAFQEALNSAGEKLV--VVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDD--CQDVAAECEVKCMPTFQFFKKGQKVSEFSGANKEKLEATINEL 104          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 3
Query:  300 NILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHP-HVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLK 605
            +++VI+S   +++ L K K++  P +  FTA WCGPCK I P+   LS  +   V   K+D+D   + +      I+A+PTF  ++ G K  ++VGA   +LK
Sbjct:    4 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD--AVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLK 104          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 3
Query:  348 KVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            KV D + P +  F A WCGPCK I P + +LS  H  +  YK+D+D+  L    +   +SA+PTF F++ G++  E+ GA  + ++  ++ +
Sbjct:   15 KVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDE--LSEVAASNGVSAMPTFHFYKGGERNEEVKGANPAAIQAGVKAI 104          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO_BOVIN (Thioredoxin OS=Bos taurus GN=TXN PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 35/104 (33.65%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  312 IESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTMEQL 623
            IES   F  +L    +  +  +  F+A WCGPCK I P    LS K+ +V   ++D+D    +   ++  +  +PTF FF+ G+KV E  GA   +L+ T+ +L
Sbjct:    5 IESKYAFQEALNSAGEKLV--VVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDD--CQDVAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104          
BLAST of EY744197 vs. ExPASy Swiss-Prot
Match: THIO1_DICDI (Thioredoxin-1 OS=Dictyostelium discoideum GN=trxA PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11
Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  297 SNILVIESGEEFNSSLGKVKDDSLPAIFYFTAAWCGPCKFIWPVIGELSAKHPHVTTYKIDIDQKGLESTLSKLNISAVPTFLFFQHGKKVAEIVGAEVSRLKTTME 617
            + ++ + S EE +  L   +D+ +  +  F+A WCGPC+ I PV  +LS +    T   +DID+  +   +SK  I +VPTF F+++G KV+E  GA  S L++T+E
Sbjct:    3 NRVIHVSSCEELDKHL---RDERV--VVDFSAVWCGPCRAISPVFEKLSNEFITFTFLHVDIDKLNVHPIVSK--IKSVPTFHFYRNGSKVSEFSGASESILRSTLE 102          
The following BLAST results are available for this feature:
BLAST of EY744197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
THIO_CALJA3.109e-1133.98Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3[more]
THIO_SHEEP4.061e-1133.65Thioredoxin OS=Ovis aries GN=TXN PE=3 SV=2[more]
TRXH_CHLRE5.304e-1134.95Thioredoxin H-type OS=Chlamydomonas reinhardtii GN... [more]
THIO_PENCH5.304e-1134.78Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=... [more]
THIO_BOVIN5.304e-1133.65Thioredoxin OS=Bos taurus GN=TXN PE=3 SV=3[more]
THIO1_DICDI9.047e-1136.45Thioredoxin-1 OS=Dictyostelium discoideum GN=trxA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744197 ID=EY744197; Name=EY744197; organism=Citrus sinensis; type=EST; length=861bp
CGCCCGCAGTGGCACCGCTCCCAAAAACCCTAACGAAGAAGAGAGGTGAA
TTTGCAGAGAAAATGAGAGGAAGTTCTTCAGTTATTTTGCGTCGATTACT
TGTTCGACGCCAAGTCTTAAATCCCAATTCTACTAATATTGCAAAATTAC
TAATTTCGCATTCTACAAACAACACTACTGTTCCCAAGATACCCTCGTTC
CGTAATTATATTCCTGCTAGCTCCTCGCAATCACAGTCACAGATGCTTCC
TTCTCTTCAATTCCACAGAACTCTGTTCTCATCCCCAGATGGTCCATCAA
ATATTCTAGTCATCGAGTCAGGGGAAGAGTTCAATAGCTCACTTGGCAAA
GTTAAAGATGATTCTCTGCCAGCGATATTTTATTTCACTGCTGCTTGGTG
TGGCCCCTGCAAGTTTATATGGCCTGTCATAGGGGAGTTGAGTGCAAAAC
ACCCTCATGTAACAACATATAAGATTGACATTGACCAGAAAGGACTTGAA
AGCACATTAAGCAAGTTAAACATCAGTGCTGTGCCAACATTCTTGTTCTT
TCAACATGGAAAAAAGGTGGCTGAAATAGTTGGTGCTGAAGTCTCACGGT
TGAAAACAACTATGGAACAACTTTACAAGAAGGATGGAATGAAGTAAGGA
TAACTGGATCAAATGACCTTGAAAAATTTTCAGGAAAAATTTTGGGAAAG
AGGAAGATATTTGGTTTTTGGTGTCAGGGTAAAAAAAAACTTTGGAAAAT
TACGAATCCCTTTTAATTCAAACCCCTTTTTGGAAAGGAAAAATTAAAGG
GTTTTTTTTTTTTTTTTTTTTTTTCCCCTCCCCCGGGAACCTCTAAAATT
TTACGTTCTAA
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