EY660556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_PORPU (Photosystem I reaction center subunit II OS=Porphyra purpurea GN=psaD PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.493e-42 Identity = 86/140 (61.43%), Postives = 101/140 (72.14%), Query Frame = 3 Query: 219 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHD 635 P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR+G NLL LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGE QYLHPKDGV+PEK+N + + IGKNV+PI KFT K +D Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLYLAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDHSIGKNVNPINVKFTNKATYD 141
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_ODOSI (Photosystem I reaction center subunit II OS=Odontella sinensis GN=psaD PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.344e-42 Identity = 86/131 (65.65%), Postives = 98/131 (74.81%), Query Frame = 3 Query: 228 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTG 620 L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LARKEQCLALGT+LR+ Y+ YR+FP+GE QYLHPKDGV+PEK+NP + V IGKN +P KF+G Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSG 133
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_PORYE (Photosystem I reaction center subunit II OS=Porphyra yezoensis GN=psaD PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.677e-42 Identity = 84/140 (60.00%), Postives = 101/140 (72.14%), Query Frame = 3 Query: 219 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHD 635 P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL LA+KEQCLALGT+L+SK+KI Y+ YRVFPNGE QYLHPKDGV+PEK+N + V IG+N++P++ KF K +D Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRNGENLLYLAKKEQCLALGTQLKSKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNTGRASVNSVDHSIGQNINPVDVKFMNKATYD 141
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_SKECO (Photosystem I reaction center subunit II OS=Skeletonema costatum GN=psaD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.803e-41 Identity = 84/131 (64.12%), Postives = 97/131 (74.05%), Query Frame = 3 Query: 228 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTG 620 L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LARKEQCLAL T+LR+ Y+ YR+FP+GE QYLHPKDGV+PEK+NP + V IGKN +P KF+G Sbjct: 3 LNLKTPFPTFGGSTGGWLRAAEVEEKYAITWTSAKEQIFEMPTGGSAIMRNGENLLYLARKEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSG 133
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_MASLA (Photosystem I reaction center subunit II OS=Mastigocladus laminosus GN=psaD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.803e-41 Identity = 80/130 (61.54%), Postives = 100/130 (76.92%), Query Frame = 3 Query: 246 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHD 635 +PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MR+G NLL LARKEQC+ALG++LR Y+ YR++PNGE Y+HP DGV+PEK+NP ++ V N IG+N P + KF+G +D Sbjct: 9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLARKEQCIALGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAKLKFSGVATYD 138
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_SYNY3 (Photosystem I reaction center subunit II OS=Synechocystis sp. (strain PCC 6803) GN=psaD PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.183e-39 Identity = 82/133 (61.65%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 249 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYK---I*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHDL 638 P FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM EG NLL LARKEQCLALGT+LR+K+K Y+ YRV+P+GE QYLHP DGV+PEK+N +E G IG+N P+ KF+GK +++ Sbjct: 9 PKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEPVTIKFSGKAPYEV 141
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_SYNP6 (Photosystem I reaction center subunit II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaD PE=1 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.889e-37 Identity = 77/130 (59.23%), Postives = 95/130 (73.08%), Query Frame = 3 Query: 246 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYK---I*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQ 626 +P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M EG NLL ARKEQ LALGT+LR+K+K Y+ YR FP + YLHPKDGV+PEK+N + G+ IG+N +P KFTGKQ Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALALGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPNPATIKFTGKQ 138
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_CYACA (Photosystem I reaction center subunit II OS=Cyanidium caldarium GN=psaD PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.889e-37 Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 228 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGK 623 L+ PSP F G+TGG LR + +EE Y ITW S E IFE+PTGG A M+ G NLL LA+KEQCLALG +L+ K+KI ++ YR+FPNGEAQ+LHPKDGV+PEK+N ++ +G+ IGKN++P E KFT K Sbjct: 5 LNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIGKNLNPAEVKFTHK 137
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_THEVL (Photosystem I reaction center subunit II OS=Thermosynechococcus vulcanus GN=psaD PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.599e-36 Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 3 Query: 249 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGT-RLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHD 635 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEK+N +E V IG+N +P + KFTGK+ +D Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138
BLAST of EY660556 vs. ExPASy Swiss-Prot
Match: PSAD_THEEB (Photosystem I reaction center subunit II OS=Thermosynechococcus elongatus (strain BP-1) GN=psaD PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.599e-36 Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 3 Query: 249 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGT-RLRSKYKI*YQFYRVFPNGEAQYLHPKDGVYPEKMNPRKEGVGQNYTPIGKNVSPIEGKFTGKQGHD 635 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MREG NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEK+N +E V IG+N +P + KFTGK+ +D Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138 The following BLAST results are available for this feature:
BLAST of EY660556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660556 ID=EY660556; Name=EY660556; organism=Citrus sinensis; type=EST; length=850bpback to top |