EY660550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_METMP (30S ribosomal protein S4e OS=Methanococcus maripaludis GN=rps4e PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.353e-28 Identity = 75/244 (30.74%), Postives = 126/244 (51.64%), Query Frame = 1 Query: 88 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFENIHIQDALGHEVATRLGNXVTIGEGSKPWVSL 795 +G +KHLKRL AP +W L + F +PS GPH + LPL+LV+R+ LKYA RE I+ +L+DG R + +PAG MDV+SIP+ +E + +L+D GR L + ++ KLCK+ + + G +N +DGR + + + K D++ + + E I + F G + +TGG++ G I E + + +++ G + T +G+ +P +S+ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLK--KTDKTDVKLCKIVNKTVVKGGNIQLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_UNCMA (30S ribosomal protein S4e OS=Uncultured methanogenic archaeon RC-I GN=rps4e PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.953e-27 Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFEN 702 HLKR+ AP+ W + + + KP G H +PL++VLR+ LK A E+ IL + VLVDGKVR D Y G D +SIP N N+R++ G+F L + D A K+CK+ + + G +N +DG T+ + K D++ L + E KI + VG++VMVT G++ G +G +K + + S N Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEGKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKFHLVPVTDASA--KICKIVNKTALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHSGEIGKVKEIKVVRSSAPN 201
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_IGNH4 (30S ribosomal protein S4e OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps4e PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.551e-27 Identity = 84/252 (33.33%), Postives = 130/252 (51.59%), Query Frame = 1 Query: 82 MAR--GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLL-YDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFENIHIQDALGHEVATRLGNXVTIGEGSKPWVSLPK 801 MAR G K+HLKRL AP W + + +A KP GPH E +PL++++R+ L YA T RE ++ + + VDG+VR D +P G MDV+ I +E +R++ Y K + + EEAK K+C++ + + G +N +DGR IR DP K + + + E +I D++ F+ G I +V GRN GRVG I+ K G + + + EV + V +P + LP+ Sbjct: 1 MARVGGGKRHLKRLAAPAFWPIHRKEAVWAVKPRPGPHPIEESIPLLILVRDVLGYAETSREARKLIAEGRIKVDGRVRKDYKFPVGAMDVIEIVGADEYYRMIPYPVKYLVPMR-IDAEEAKKKICRIENKVTVKGGHVQLNLHDGRNVLIRVEDPRNPVEAQEYKTLGGLLITVPEQEILDYVPFEEGVIAIVKSGRNVGRVGRIEEIVKGMGRKKTLVKMRDVHDEVFYTVAEYVFPIGKEEPLIKLPE 251
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_METAC (30S ribosomal protein S4e OS=Methanosarcina acetivorans GN=rps4e PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.332e-27 Identity = 70/200 (35.00%), Postives = 103/200 (51.50%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFEN 702 H KRL+ PK W + K G + GPH LPL +++R+ LK RE IL + VLVDG R D +P G DV+++P NE +R+L D KGR LH L + KLC++ + + G +N DG I + D++ L + + ++ +KF+VGN+ MV GG++ G G I + K S N Sbjct: 3 HQKRLSVPKSWKVGKKGNKWISTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLTLHKLNETNVN-KLCRINNKTTVKGGKFQLNLNDGTNIIGSNE-YGTKDSLILSIPDKQVVKHLKFEVGNLAMVVGGQHSGETGKIMEIREVKSSRHN 200
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_METMA (30S ribosomal protein S4e OS=Methanosarcina mazei GN=rps4e PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.811e-26 Identity = 69/200 (34.50%), Postives = 102/200 (51.00%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFEN 702 H KRL+ PK W + + G + GPH LPL L++R+ LK RE IL + VLVDG R D +P G DV+++P NE +R+L D KGR L+ L + KLC++ + + G +N DG I + D++ L + + + +KF+VGN+ MV GG++ G G I + K S N Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLNETNVN-KLCRINNKTTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGKIMEIREVKSSRHN 200
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_METBF (30S ribosomal protein S4e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps4e PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.283e-26 Identity = 69/200 (34.50%), Postives = 100/200 (50.00%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFEN 702 H KRL+ P+ W K G + GPH LPL +++R+ LK RE IL + VLVDG R D +P G DV+++P NE +R+ D KGR LH L KLC++ + + G +N DG I + D++ L L + +I ++F VGN+ MV GG++ G +G I + K S N Sbjct: 3 HQKRLSIPRSWKAGKKGYKWVSTTRPGPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLRFPVGLFDVITLPLVNETYRMFQDEKGRLALHKLNATNVN-KLCRINNKTTLKGGKVQLNLNDGTNILGSNE-YSTKDSLILSLPDKQIVKHLQFKVGNLAMVVGGQHSGEIGKITEIREVKSSRHN 200
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_SULSO (30S ribosomal protein S4e OS=Sulfolobus solfataricus GN=rps4e PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.400e-25 Identity = 75/228 (32.89%), Postives = 115/228 (50.44%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI---RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK---GSFENIHIQDALGHEVATRLGNXVTIG 768 H+ R AP M+ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR+L D R + +EA++K ++ + ++G +N DGR I + K T+K++L +I D + + GGRN G GI+KN K + I ++ G+ T + N ++IG Sbjct: 3 HITRFEAPWFLMISKKQYKWTVRPNAGPHSIEKSIPLAVVIRDYLKLAGTIREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVLPDNVRFMRFSKISADEARYKYVRIINKTTIKEGRIQLNLEDGRNILVDKETAKNFKTLMTLKIELPSQQILDSFTISERSYAIFVGGRNVGIHGIVKNINLSKFKSRKYSVITLESRDGNTYQTNIMNVMSIG 230
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_SULIY (30S ribosomal protein S4e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps4e PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.388e-25 Identity = 73/228 (32.02%), Postives = 113/228 (49.56%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND---TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK---GSFENIHIQDALGHEVATRLGNXVTIG 768 H+ R P ++ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR++ D RL + +EA +K ++ + + G +N DGR I K+ T+K++L I D G+ + GG+N G G++KN K + I ++ G+ T L N ++IG Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKNVGIHGVVKNINLSKFKSRKYSVITLESKDGNTYQTNLMNVMSIG 230
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_SULIN (30S ribosomal protein S4e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps4e PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.388e-25 Identity = 73/228 (32.02%), Postives = 113/228 (49.56%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND---TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK---GSFENIHIQDALGHEVATRLGNXVTIG 768 H+ R P ++ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR++ D RL + +EA +K ++ + + G +N DGR I K+ T+K++L I D G+ + GG+N G G++KN K + I ++ G+ T L N ++IG Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKNVGIHGVVKNINLSKFKSRKYSVITLESKDGNTYQTNLMNVMSIG 230
BLAST of EY660550 vs. ExPASy Swiss-Prot
Match: RS4E_SULIM (30S ribosomal protein S4e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps4e PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.388e-25 Identity = 73/228 (32.02%), Postives = 113/228 (49.56%), Query Frame = 1 Query: 103 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND---TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK---GSFENIHIQDALGHEVATRLGNXVTIG 768 H+ R P ++ K + +P++GPH + +PL +V+R+ LK A T RE I+ VLVDGKVR D YP G MD+VSIP + FR++ D RL + +EA +K ++ + + G +N DGR I K+ T+K++L I D G+ + GG+N G G++KN K + I ++ G+ T L N ++IG Sbjct: 3 HITRFETPWFLVISKKQYKWTVRPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGLMDIVSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRNILVDKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKNVGIHGVVKNINLSKFKSRKYSVITLESKDGNTYQTNLMNVMSIG 230 The following BLAST results are available for this feature:
BLAST of EY660550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660550 ID=EY660550; Name=EY660550; organism=Citrus sinensis; type=EST; length=899bpback to top |