EY660540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21 Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQAGY-----SSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAK 521 MGR K++++RIENK+ QVTF KRR+GL+KKA EL++LCD ++AL++FSSRGRLYEF + +S S +ERY+ A + + AP + Y + + + L+ R L G + TA IR+ K +L+ I +Q + Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKK--ASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKR 158
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 60/167 (35.93%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNF-EQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAKVHLINTFHTLL 554 M R K+QL+RIEN QVTF KRR+GL+KKARELS+LC+ D+ ++IFS+ G+LY+ + ++ ++ERY+S E+A A G + DP+ L LL+ R + G E T IR+ K Q+M+ I+ L++K ++ + +L Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRM-DPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEIL 166
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21 Identity = 60/167 (35.93%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNF-EQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAKVHLINTFHTLL 554 M R K+QL+RIEN QVTF KRR+GL+KKARELS+LC+ D+ ++IFS+ G+LY+ + ++ ++ERY+S E+A A G + DP+ L LL+ R + G E T IR+ K Q+M+ I+ L++K ++ + +L Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQANACGDQRM-DPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEIL 166
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.072e-20 Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ--SRIAEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAK 521 MGR ++QL+RIENK QVTFSKRRSGL+KKA E+SVLCD ++ L++FS++G+L+E+ + + ILERY+ S ++ V + + L E+L+ Q+ G + E + IR+ K QLM SI LQ K Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKK 157
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20 Identity = 63/158 (39.87%), Postives = 87/158 (55.06%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS--RIAEEAVASGAPKAE-DPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAK 521 MGR K++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RGRL+EF ++ + LERY+S AS A + E Y L E L+ QR L G + + IR+ K Q ++ + L+ K Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRK 158
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20 Identity = 63/158 (39.87%), Postives = 87/158 (55.06%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS--RIAEEAVASGAPKAE-DPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAK 521 MGR K++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RGRL+EF ++ + LERY+S AS A + E Y L E L+ QR L G + + IR+ K Q ++ + L+ K Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRK 158
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20 Identity = 65/158 (41.14%), Postives = 88/158 (55.70%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQAGY---SSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAK 521 MGR +++L+RIENK QVTFSKRR+GL+KKA ELSVLCD ++AL+IFSSRG+LYEF SA + LE+Y S ++ A + Q+ Y S L E L+ QR + G + + R KTQ+MM + L+ K Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA-GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRK 157
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.617e-20 Identity = 62/159 (38.99%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS----RIAEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAK 521 M R + +L+RIEN + QVTFSKRR+GL+KKA ELSVLCD ++AL++FS RGRLYEF SA SL ++RY++ + + + + +D G L E L +R++ G N E F+ IR KT+L+ I L+ K Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLG---LAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEK 156
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.617e-20 Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQAG---YSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAK 521 M R K +++RIEN + QVTFSKRR+GL+KKA ELSVLCD ++ALVIFS R +LYEF S+ S+A+ +ERYQ RI E + + + ++ Q S L E L+I +R+L G + + IRA K QL+ I L+A+ Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEF-SSSSIAATIERYQRRIKE--IGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAE 155
BLAST of EY660540 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20 Identity = 60/167 (35.93%), Postives = 91/167 (54.49%), Query Frame = 3 Query: 57 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGA-PKAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQAKVHLINTFHTLL 554 M R K+Q++RIEN QVTF KRR GL+KKARELSVLCD D+ ++IFSS+G+L+E + ++ +++ERYQS +A + GA + + + G L +LL+ R G + T IR K Q+M I+ L+ K ++ + +L Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEML 167 The following BLAST results are available for this feature:
BLAST of EY660540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660540 ID=EY660540; Name=EY660540; organism=Citrus sinensis; type=EST; length=843bpback to top |