EY660502

Overview
NameEY660502
Unique NameEY660502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13
Identity = 63/196 (32.14%), Postives = 84/196 (42.86%), Query Frame = 2
Query:  233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  I   S  ++  TQ++LMG+VE  R      P  + ++                    YPGG F DPL LA          D +    LKV E+K+ RLAM +M  F+  A
Sbjct:   66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGG--GPLGEGLDPL------------------YPGGAF-DPLGLAD---------DPDSFAELKVKELKNGRLAMFSMFGFFVQA 231          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 68/210 (32.38%), Postives = 88/210 (41.90%), Query Frame = 2
Query:  233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGAD------------PGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGAGQAKPTWGSWVENM 805
            P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G    +  A +G+      WF+AGA             P  I   S  ++   Q++LMG +E  R                     A        +  YPGG F DPL LA          D +    LKV EIK+ RLAM +M  F+    QA  T    +EN+
Sbjct:   79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYR--------------------VAGGPLGEVTDPIYPGGNF-DPLGLAD---------DPDAFAELKVKEIKNGRLAMFSMFGFFV---QAIVTGKGPIENL 255          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 64/197 (32.49%), Postives = 83/197 (42.13%), Query Frame = 2
Query:  230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            +P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  +   S  ++   Q++LMG VE  R      P  + V                  +  YPGG  FDPL LA          D E    LKV EIK+ RLAM +M  F+  A
Sbjct:   67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 67/210 (31.90%), Postives = 90/210 (42.86%), Query Frame = 2
Query:  233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGAGQAKPTWGSWVENM 805
            P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  +   S  ++   Q++LMG+VE  R      P  + ++                  + YPGG F DPL LA          D E    LKV EIK+ RLAM +M  F+    QA  T    +EN+
Sbjct:   66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLD------------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFV---QAIVTGKGPIENL 242          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 63/197 (31.98%), Postives = 81/197 (41.12%), Query Frame = 2
Query:  230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            +P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  +   S  ++   Q++LMG VE                      R A        +  YPGG  FDPL LA          D E    LKV EIK+ RLAM +M  F+  A
Sbjct:   65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 231          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 63/197 (31.98%), Postives = 83/197 (42.13%), Query Frame = 2
Query:  230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            +P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  +   S  ++  TQ++LMG VE  R      P  + V                  +  YPGG  FDPL LA            E    LKV E+K+ RLAM +M  F+  A
Sbjct:   28 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLAEV---------PEAFAELKVKELKNGRLAMFSMFGFFVPA 194          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13
Identity = 64/196 (32.65%), Postives = 82/196 (41.84%), Query Frame = 2
Query:  233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  I   S  ++   Q++LMG VE  R      P  + V                  +  YPGG  FDPL LA          D E    LKV E+K+ RLAM +M  F+  A
Sbjct:   63 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFAELKVKELKNGRLAMFSMFGFFVQA 228          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 64/197 (32.49%), Postives = 83/197 (42.13%), Query Frame = 2
Query:  230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            +P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  +   S  ++   Q++LMG VE  R      P  + V                  +  YPGG  FDPL LA          D E    LKV EIK+ RLAM +M  F+  A
Sbjct:   67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 64/197 (32.49%), Postives = 83/197 (42.13%), Query Frame = 2
Query:  230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            +P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  +   S  ++   Q++LMG VE  R      P  + V                  +  YPGG  FDPL LA          D E    LKV EIK+ RLAM +M  F+  A
Sbjct:   65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 231          
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 63/197 (31.98%), Postives = 81/197 (41.12%), Query Frame = 2
Query:  230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763
            +P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   +G          G  +    WF+AG+            +P  +   S  ++   Q++LMG VE                      R A        +  YPGG  FDPL LA          D E    LKV EIK+ RLAM +M  F+  A
Sbjct:   66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGEPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232          
The following BLAST results are available for this feature:
BLAST of EY660502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CB215_PEA1.115e-1332.14Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB2A_PINSY1.456e-1332.38Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB2A_SPIOL1.902e-1332.49Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB24_SOLLC1.902e-1331.90Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB22_TOBAC1.902e-1331.98Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB21_PEA1.902e-1331.98Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB21_MAIZE1.902e-1332.65Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB2G_SOLLC2.484e-1332.49Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB2B_SOLLC2.484e-1332.49Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB25_NICPL2.484e-1331.98Chlorophyll a-b binding protein E, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660502 ID=EY660502; Name=EY660502; organism=Citrus sinensis; type=EST; length=849bp
CCCATTCTGCAGCTACAGAAGTCAAGTAGAGATCATATCTATGGCGGCTG
CAACATCCGGGGCTGTGTTAAACGGATTGGGTTCTTCATTCATAAATGGT
GGCAAGAAGAGCCAGGCTCTTTTGGCTGGCACGAATAGAGTGACAAGTTC
TAAAAAGTCAGTTGTTGTAGCTGCTCTTCCACCTAAAAAATCTTGGATTC
CTGCTGTTAAAGGTGGTGGCAACCTCATTAATCCCGAATGGCTCGATGGC
TCTCTCCCAGGTGACTACGGATTCGACCCACTTGGGCTTGGAAAGGACCC
AGCATTCCTGAAATGGTACAGAGAAGCAGAACTGATCCACGGACGATGGG
CAATGGCTGCAGTTGTTGGGATATTCGTCGGACAGGCGTGGAGTGGGATT
CCATGGTTCGAGGCTGGAGCAGATCCTGGAGCCATAGCACCCTTCTCCTT
CGGCTCACTCCTGGGAACCCAGCTTCTCCTTATGGGTTGGGTTGAGAGCA
AGCGGTGGGTTGATTTTTTCAATCCTGAATCTCAATCAGTTGAATGGGCA
ACACCTTGGTCAAGAACTGCTGAAAACTTTGCCAATGCGACTGGTGAACA
AGGCTACCCTGGTGGAAAGTTTTTTGATCCCTTATGTTTGGCTGGAACAA
TTAAGGATGGTGTCTACATTCCTGACACTGAGAAGCTTGACAGGCTCAAA
GTTGCTGAGATTAAACATGCTAGGCTTGCTATGGTGGCCATGTTGATTTT
CTACTTTGGAGCTGGGCAAGCAAAACCCACTTGGGGGTCTTGGGTTGAAA
ACATGCTTATGAAGATACTCACTGATTGTGGTAAAGGGAATCATCGGAT
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