EY660502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13 Identity = 63/197 (31.98%), Postives = 81/197 (41.12%), Query Frame = 2 Query: 230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763 +P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ A Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13 Identity = 77/264 (29.17%), Postives = 99/264 (37.50%), Query Frame = 2 Query: 41 MAAATSGAVLNGLGSSFINGGKKSQALLAGTNRVTXXXXXXXXXXLPPKKSWI--PAVKGGGNLIN--PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763 MAAAT + +N SQ + G + T + W VK G P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ A Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQ--ITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13 Identity = 63/197 (31.98%), Postives = 81/197 (41.12%), Query Frame = 2 Query: 230 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763 +P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ A Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13 Identity = 62/196 (31.63%), Postives = 80/196 (40.82%), Query Frame = 2 Query: 233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG F DPL LA D E LKV E+K+ RLAM +M F+ A Sbjct: 56 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR--------------------IAGGPLGEVTDPIYPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQA 221
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 63/196 (32.14%), Postives = 83/196 (42.35%), Query Frame = 2 Query: 233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763 P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+ WF+AG+ +P + S ++ Q++LMG +E R A + YPGG F DPL LA D E LKV EIK+ RLAM +M F+ A Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYR--------------------VAGGPLGEVTDPLYPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 67/210 (31.90%), Postives = 90/210 (42.86%), Query Frame = 2 Query: 233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGAGQAKPTWGSWVENM 805 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ +Q++LMG +E R P + ++ + YPGG F DPL LA D E LKV EIK+ RLAM +M F+ QA T +EN+ Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGG--GPLGEGLD------------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFV---QAIVTGKGPIENL 242
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 64/196 (32.65%), Postives = 82/196 (41.84%), Query Frame = 2 Query: 233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG VE R P + V + YPGG FDPL LA D E LKV E+K RLAM++M F+ A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFGELKVKELKKGRLAMLSMFGFFVQA 231
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13 Identity = 67/210 (31.90%), Postives = 88/210 (41.90%), Query Frame = 2 Query: 233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGAD------------PGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGAGQAKPTWGSWVENM 805 P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+ WF+AGA P I S ++ Q++LMG +E R A + YPGG F DPL LA D + +KV EIK+ RLAM +M F+ QA T +EN+ Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYR--------------------VAGGPLGEVTDPIYPGGNF-DPLGLAD---------DPDAFADVKVKEIKNGRLAMFSMFGFFV---QAIVTGKGPIENL 255
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13 Identity = 67/210 (31.90%), Postives = 89/210 (42.38%), Query Frame = 2 Query: 233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGAGQAKPTWGSWVENM 805 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG+VE R P + ++ YPGG F DPL LA D + LKV EIK+ RLAM +M F+ QA T +EN+ Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDPI------------------YPGGAF-DPLGLAD---------DPDAFAELKVKEIKNGRLAMFSMFGFFV---QAIVTGKGPIENL 242
BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13 Identity = 65/196 (33.16%), Postives = 82/196 (41.84%), Query Frame = 2 Query: 233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGA 763 P +L G P DYG+D GL DP RE E+IH RWAM +G + A +GI WF+AGA +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ A Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233 The following BLAST results are available for this feature:
BLAST of EY660502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660502 ID=EY660502; Name=EY660502; organism=Citrus sinensis; type=EST; length=849bpback to top |