EY660502

Overview
NameEY660502
Unique NameEY660502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660502 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 65/201 (32.34%), Postives = 88/201 (43.78%), Query Frame = 2 
Query:  233 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGAD---PGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFGAGQAKPTWGSWVENM 805
            P +L G  PGDYG+D  GL  DP      RE E+IH RWA+A  +G    +  A +G+      WF+AG+     G ++     SL+  Q +L  W              Q V          E +  A G  G    +  DPL L G+        D E+   LKV EIK+ RLAM +M  F+    QA  T    +EN+
Sbjct:   65 PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWA------------CQVVLMGA-----VEGYHVAGGRLG----EVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFV---QAIVTGKGPIENL 241
The following BLAST results are available for this feature:
BLAST of EY660502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CB48_MAIZE1.363e-1132.34Chlorophyll a-b binding protein 48, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660502 ID=EY660502; Name=EY660502; organism=Citrus sinensis; type=EST; length=849bp
CCCATTCTGCAGCTACAGAAGTCAAGTAGAGATCATATCTATGGCGGCTG
CAACATCCGGGGCTGTGTTAAACGGATTGGGTTCTTCATTCATAAATGGT
GGCAAGAAGAGCCAGGCTCTTTTGGCTGGCACGAATAGAGTGACAAGTTC
TAAAAAGTCAGTTGTTGTAGCTGCTCTTCCACCTAAAAAATCTTGGATTC
CTGCTGTTAAAGGTGGTGGCAACCTCATTAATCCCGAATGGCTCGATGGC
TCTCTCCCAGGTGACTACGGATTCGACCCACTTGGGCTTGGAAAGGACCC
AGCATTCCTGAAATGGTACAGAGAAGCAGAACTGATCCACGGACGATGGG
CAATGGCTGCAGTTGTTGGGATATTCGTCGGACAGGCGTGGAGTGGGATT
CCATGGTTCGAGGCTGGAGCAGATCCTGGAGCCATAGCACCCTTCTCCTT
CGGCTCACTCCTGGGAACCCAGCTTCTCCTTATGGGTTGGGTTGAGAGCA
AGCGGTGGGTTGATTTTTTCAATCCTGAATCTCAATCAGTTGAATGGGCA
ACACCTTGGTCAAGAACTGCTGAAAACTTTGCCAATGCGACTGGTGAACA
AGGCTACCCTGGTGGAAAGTTTTTTGATCCCTTATGTTTGGCTGGAACAA
TTAAGGATGGTGTCTACATTCCTGACACTGAGAAGCTTGACAGGCTCAAA
GTTGCTGAGATTAAACATGCTAGGCTTGCTATGGTGGCCATGTTGATTTT
CTACTTTGGAGCTGGGCAAGCAAAACCCACTTGGGGGTCTTGGGTTGAAA
ACATGCTTATGAAGATACTCACTGATTGTGGTAAAGGGAATCATCGGAT
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