EY660438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1) HSP 1 Score: 462.996 bits (1190), Expect = 9.888e-130 Identity = 229/286 (80.07%), Postives = 244/286 (85.31%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ FEPSSMMAKCDPRH KYM CCLMYRGDVVP + IKT+ T++FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA1_ORYSJ (Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica GN=TUBA1 PE=1 SV=1) HSP 1 Score: 462.996 bits (1190), Expect = 9.888e-130 Identity = 229/286 (80.07%), Postives = 244/286 (85.31%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ FEPSSMMAKCDPRH KYM CCLMYRGDVVP + IKT+ T++FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1) HSP 1 Score: 462.996 bits (1190), Expect = 9.888e-130 Identity = 229/286 (80.07%), Postives = 244/286 (85.31%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSV EITN+ FEPSSMMAKCDPRH KYM CCLMYRGDVVP + IKT+ T++FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1) HSP 1 Score: 462.225 bits (1188), Expect = 1.687e-129 Identity = 232/286 (81.12%), Postives = 245/286 (85.66%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITN+AFEP+SMM KCDPRH KYM CCLMYRGDVVP + IKT+ TI+FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1) HSP 1 Score: 462.225 bits (1188), Expect = 1.687e-129 Identity = 231/286 (80.77%), Postives = 246/286 (86.01%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANNFARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRRSLDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITN+AFEP+SMM KCDPRH KYM CCLMYRGDVVP + + IKT+ TI+FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLISGKEDAANNFARGHYTIGKEIVDLALDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1) HSP 1 Score: 461.455 bits (1186), Expect = 2.877e-129 Identity = 227/286 (79.37%), Postives = 244/286 (85.31%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KA+HEQLSV EITN+ FEP+SMMAKCDPRH KYM CCLMYRGDVVP + G IKT+ T++FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA_EUGGR (Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE=2 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 1.428e-128 Identity = 226/286 (79.02%), Postives = 247/286 (86.36%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFL F+AV VDYGKKSKLGFT+YPSPQ+ST+VVEPYNSVLSTHSLLEHTDVAV+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHF+LSSYAP+ISAEKA+HEQLSVAEITN+AFEP+SMMAKCDPRH KYM CCLMYRGDVVP + + IKT+ TI+FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLAFHAVGGGTGSGLGRLLLERLSVDYGKKSKLGFTIYPSPQISTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFVLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 1.428e-128 Identity = 228/286 (79.72%), Postives = 246/286 (86.01%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LI+GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF++V VDYGKKSKLGFTVYPSPQV+T+VVEPYNSVLSTH+LLEHTDVAV+LDNEAIYDICRRSLDI+RPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML SYAPVISAEKA+HEQLSVAEITNSAFEP+SMMAKCDPRH KYM CCLMYRGDVVP + IKT+ TI+FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 1.428e-128 Identity = 228/286 (79.72%), Postives = 246/286 (86.01%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LI+GKEDAANN+ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF++V VDYGKKSKLGFTVYPSPQV+T+VVEPYNSVLSTH+LLEHTDVAV+LDNEAIYDICRRSLDI+RPTYTNLNRL++QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML SYAPVISAEKA+HEQLSVAEITNSAFEP+SMMAKCDPRH KYM CCLMYRGDVVP + IKT+ TI+FVD PTG K GIN PP VPGGDLAK +R Sbjct: 88 HPEQLITGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFSSVGGGTGSGLGALLLERLSVDYGKKSKLGFTVYPSPQVATAVVEPYNSVLSTHALLEHTDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQR 373
BLAST of EY660438 vs. ExPASy Swiss-Prot
Match: TBA_TETTH (Tubulin alpha chain OS=Tetrahymena thermophila PE=1 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 1.865e-128 Identity = 227/286 (79.37%), Postives = 246/286 (86.01%), Query Frame = 2 Query: 2 HASELISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPSSMMAKCDPRHXKYMPCCLMYRGDVVP*ECECTCGHIKTRPTIRFVDLGPTGIKGGINLSPPPGVPGGDLAKGKR 859 H +LISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFN+V VDYGKKSKLGFT+YPSPQVST+VVEPYNS+LSTHSLLEHTDVAV+LDNEAIYDICRR+LDIERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLSSYAP+ISAEKA+HEQLSVAEITNSAFEP++MMAKCDPRH KYM C +MYRGDVVP + + IKT+ TI+FVD PTG K GIN PP VPGGDLAK R Sbjct: 88 HPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVMR 373 The following BLAST results are available for this feature:
BLAST of EY660438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660438 ID=EY660438; Name=EY660438; organism=Citrus sinensis; type=EST; length=871bpback to top |