EY660411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_THETN (Peptide chain release factor 1 OS=Thermoanaerobacter tengcongensis GN=prfA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14 Identity = 34/95 (35.79%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 607 SEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 S+D+++ +MA EEL +++++ PKD DE++ I+E+RAG G E A+ A D+F+MY Y++K+GWKVE + ++D+ G+++++ Sbjct: 67 SQDEELKEMAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKGWKVEIMSANKTDIGGFKEVI 161
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_METPB (Peptide chain release factor 1 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=prfA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14 Identity = 40/104 (38.46%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 580 GLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 G+++LI E D +M +A EE A + ++ PKD ADE+ ILE+RAGTG + A+ A D+F+MY +Y++ +GW+VE + +E + GYR++V Sbjct: 62 GIRALIDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLMLLPKDAADEKSAILEIRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVV 165
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_AGRVS (Peptide chain release factor 1 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=prfA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14 Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 E+ LK+L+ + S D++M D+A EL + PKD ADE+ ILE+RAGTG A+ A D+F+MYER++ +GWKVE + +E D G+++++ Sbjct: 58 EVADLKALLADKSTDREMRDLAEMELPDVEARLEGLEKEIQIQLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEII 164
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_RHIME (Peptide chain release factor 1 OS=Rhizobium meliloti GN=prfA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14 Identity = 38/107 (35.51%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 E+ + +++ + + DKDM D+A E ++ + PKD ADE+ ILE+RAGTG A+ A D+F+MYERY+ +GW+VE + +E + GY++++ Sbjct: 58 ELADIAAMLADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEII 164
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_METEP (Peptide chain release factor 1 OS=Methylobacterium extorquens (strain PA1) GN=prfA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 580 GLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 G++++I E D +M +A EE A + ++ PKD ADE+ ILE+RAGTG + A+ A D+F+MY RY++ +GW+VE + +E GYR++V Sbjct: 62 GIRAMIDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLILLPKDAADEKSAILEIRAGTGGDEAALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVV 165
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_METC4 (Peptide chain release factor 1 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=prfA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 580 GLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 G++++I E D +M +A EE A + ++ PKD ADE+ ILE+RAGTG + A+ A D+F+MY RY++ +GW+VE + +E GYR++V Sbjct: 62 GIRAMIDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLILLPKDAADEKSAILEIRAGTGGDEAALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVV 165
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_ALTMD (Peptide chain release factor 1 OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=prfA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 610 EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 +D +M +MA EE+ A E +R PKD D+ +C LE+RAG G + A+ A D+F+MY RY++ GW+VE V ES+ GY+++V Sbjct: 72 DDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAGDLFRMYSRYAESRGWRVELVNANESEHGGYKEVV 165
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_LEGPC (Peptide chain release factor 1 OS=Legionella pneumophila (strain Corby) GN=prfA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 574 IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 +D L L+ S+DKD+ MA EE+ + + + PKD DER+ LEVRAGTG + A+ A D+F+MY RY++ +GW++E + + + GY++++ Sbjct: 62 LDSLNELLE--SDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEII 165
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_GEOLS (Peptide chain release factor 1 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=prfA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14 Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 601 ECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 E D +M +MA EE+ E++R PKD D RD ILE+RAGTG + ++ + D+F+MY R+++K WKVE + +ES+ GY++++ Sbjct: 63 ELLADPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPNDSRDVILEIRAGTGGDESALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVI 159
BLAST of EY660411 vs. ExPASy Swiss-Prot
Match: RF1_NITWN (Peptide chain release factor 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=prfA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.127e-14 Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 571 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGREXASXVAVDVFKMYERYSQKEGWKVESVGVTESDLRGYRKLV 891 EI G+ ++I + + D +M MA E PKD DER+ +LEVRAGTG + AS A D+F+MYER++ +GWKVE + +E + GY+++V Sbjct: 56 EIAGIDAMIADPATDAEMRAMAEAERPALEARNDELMQKIRVALLPKDAMDERNVMLEVRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIV 162 The following BLAST results are available for this feature:
BLAST of EY660411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660411 ID=EY660411; Name=EY660411; organism=Citrus sinensis; type=EST; length=892bpback to top |