EY660380

Overview
NameEY660380
Unique NameEY660380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.542e-49
Identity = 87/177 (49.15%), Postives = 130/177 (73.45%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSXHI 616
            MG++ +  FS +F  K +++LM+GLD +GKTTILYKL L E+V+TI T+G+NVET+++K+++ T+WD+ G+++IR LW+ ++     +IFVVDS+DR R+ EA  EL +++ E+EL+   LL+FA KQD  + M   E+TD+LGLH ++ R WY+Q T    G G+YEGLDWLS  I
Sbjct:    1 MGISSSNPFSSIFKSKAIKLLMLGLDGSGKTTILYKLMLNEVVSTISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELKGCSLLIFATKQDCISPMEIPELTDQLGLHDIKDRRWYVQPTRTLEGIGIYEGLDWLSTKI 177          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARFF_DICDI (ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.658e-49
Identity = 90/178 (50.56%), Postives = 125/178 (70.22%), Query Frame = 2
Query:   98 FTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRML--NEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSXHIASK 625
            F  +FS    K+ +RILM+GLD AGK+T+LYKLK G+++ TIPTIGFNVE +EYKN+S  VWD+GGQ+ IR LWR Y Q T   IFVVDS DR+R  E + E+  ++  N++E  +A LL+FANKQD+ N +  AE+ + L L+SL  + W++Q   A  G+G+YEG DW+  + + K
Sbjct:   13 FVNIFSLFEGKRNIRILMIGLDGAGKSTLLYKLKFGDVIRTIPTIGFNVEIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEIKNIIEQNKNESSNASLLIFANKQDMLNPITPAELVNSLDLNSLTNKKWHVQPCSAVRGDGIYEGFDWIVSNSSGK 190          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 2.379e-47
Identity = 90/177 (50.85%), Postives = 127/177 (71.75%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSXHI 616
            MGL F KL+S LF  +E ++++VGLD+AGKTTILY+  + E+V T PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANKQD+   M AAEI+  L L S++   W+IQS CA +GEGL +GL+W++  I
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.379e-47
Identity = 90/177 (50.85%), Postives = 127/177 (71.75%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSXHI 616
            MGL F KL+S LF  +E ++++VGLD+AGKTTILY+  + E+V T PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANKQD+   M AAEI+  L L S++   W+IQS CA +GEGL +GL+W++  I
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.630e-46
Identity = 86/173 (49.71%), Postives = 125/173 (72.25%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 604
            MG+ FT+++ RLF  +E ++++VGLD+AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +RP W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.227e-45
Identity = 85/173 (49.13%), Postives = 124/173 (71.68%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 604
            MG+ FT+++ RLF  +E ++++VGLD+AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.227e-45
Identity = 85/173 (49.13%), Postives = 124/173 (71.68%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 604
            MG+ FT+++ RLF  +E ++++VGLD+AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.227e-45
Identity = 85/173 (49.13%), Postives = 124/173 (71.68%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 604
            MG+ FT+++ RLF  +E ++++VGLD+AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.105e-44
Identity = 81/173 (46.82%), Postives = 122/173 (70.52%), Query Frame = 2
Query:   98 FTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSXHI 616
            F  +++R F   E ++++VGL++AGKTT LYKL L E+V+T PT+G N+E   Y+NI   +WD+GGQD +R  W  Y+ NTQ +I V+DS DR RV   ++EL +ML  + L+ +++L++ANKQDL +AM+  E++  L LHS++   ++IQ+ CA +G+GL  GLDWL  HI
Sbjct:    8 FASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180          
BLAST of EY660380 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 4.643e-43
Identity = 85/178 (47.75%), Postives = 118/178 (66.29%), Query Frame = 2
Query:   86 MGLTFTKLFSRLFAKKEMRILMVGLDSAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-QRHWYIQSTCATSGEGLYEGLDWLSXHI 616
            MGL   KLF   +  K+ +I++VGLD+AGKTTILY     + V T PTIG NVE V Y+N+ F +WD+GGQ+ +R  W  Y+  T  +I V+DS+D  R+   +++LH ML  ++L  A +LV ANKQDLP AMN AE++ +LGL +LR  R W I   CA  GEGL E L+W++ ++
Sbjct:    1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178          
The following BLAST results are available for this feature:
BLAST of EY660380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARFD_DICDI2.542e-4949.15ADP-ribosylation factor D OS=Dictyostelium discoid... [more]
ARFF_DICDI9.658e-4950.56ADP-ribosylation factor F OS=Dictyostelium discoid... [more]
ARL5B_MOUSE2.379e-4750.85ADP-ribosylation factor-like protein 5B OS=Mus mus... [more]
ARL5B_HUMAN2.379e-4750.85ADP-ribosylation factor-like protein 5B OS=Homo sa... [more]
ARL5A_MOUSE2.630e-4649.71ADP-ribosylation factor-like protein 5A OS=Mus mus... [more]
ARL5A_RAT2.227e-4549.13ADP-ribosylation factor-like protein 5A OS=Rattus ... [more]
ARL5A_HUMAN2.227e-4549.13ADP-ribosylation factor-like protein 5A OS=Homo sa... [more]
ARL5A_BOVIN2.227e-4549.13ADP-ribosylation factor-like protein 5A OS=Bos tau... [more]
ARL5_DICDI1.105e-4446.82ADP-ribosylation factor-like protein 5 OS=Dictyost... [more]
ARL5_CAEEL4.643e-4347.75ADP-ribosylation factor-like protein 5 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660380 ID=EY660380; Name=EY660380; organism=Citrus sinensis; type=EST; length=943bp
CCACGCGTCCGAAAGCTCTTTCTCTTGACTTGACCATCAACGGCAAAATC
TAAATCCATCACAAGTTAATTAACAACAGCCAGAGATGGGATTGACGTTC
ACGAAGTTGTTTAGTCGGTTATTTGCGAAGAAGGAGATGCGAATTCTAAT
GGTGGGTCTCGACTCCGCCGGTAAGACCACTATTTTGTACAAGCTTAAGC
TCGGTGAGATCGTCACCACCATCCCTACAATCGGTTTTAATGTGGAGACG
GTTGAATACAAGAACATTAGCTTCACGGTTTGGGATGTCGGAGGTCAGGA
CAAGATCCGTCCATTGTGGAGGCACTATTTTCAGAACACTCAGGGCCTCA
TTTTTGTGGTGGATAGCAATGACAGGGATAGAGTAGTTGAGGCAAGGGAT
GAGTTGCACCGAATGTTGAATGAGGATGAATTGAGGGATGCTGTTCTGCT
TGTATTTGCTAACAAACAAGATCTTCCGAATGCAATGAATGCTGCAGAAA
TAACTGACAAGCTCGGTCTTCATTCTCTTCGCCAGCGACACTGGTATATC
CAGAGCACATGTGCAACCTCTGGAGAGGGTCTTTATGAAGGTTTGGATTG
GCTTTCCNNACACATCGCTAGCAAGGCTTGAATGAAGCAGTGAAGATTCT
GGCTCCTCTTTTAGATTTTGNTATGGCTTATACCTATTCTAGCTATTTCT
GAAGAGATAAGTTCCCTTTTTGTCAGGCACTTCTATAACAGCATTATGTT
TGTTGAAAATCTACTGCTATGGGAAGNATGGATTTTTGTATATCCTACAT
AACTATTAAAATGATGATGCGNCTGGTTCGGAAAAAAAAAATAAAAGGGC
CGGCCGCTCCTAAAGGATCCAAGTTACGGTAGCCGGGATGGGAAGCCATA
AGCTTTCTTATATGGCCCCTAAAATCAATCCCTGGGCGGCCGT
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