EY660371

Overview
NameEY660371
Unique NameEY660371
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660371 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.215e-48
Identity = 103/263 (39.16%), Postives = 151/263 (57.41%), Query Frame = 2 
Query:   38 LLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKILYIKPPGNIYSFNDLVSLWERKIGKTLQRVYVPEEQVLKNIQEAAPPVNVILSIQHSAFVKGDXTXFQX*PIVGSESSQLYPDVQYTTVDEYLSQFV 820
            ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK ++ +P  N YS N+L SLWE+KIG+TL R  V  +++L +  E   P +++ S  H  F+ G    F        E   LYPD ++ ++D+    FV
Sbjct:   55 IIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317
The following BLAST results are available for this feature:
BLAST of EY660371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN1.215e-4839.16Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660371 ID=EY660371; Name=EY660371; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGACACTCTCCGATCCTTCCAATCTCAGCTCCTCGATCACT
TCAAAAAACTCGGCGTCAATCTCGTCATCGGAGATGTGTTGAATCACGAG
AGCTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGG
TCACACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAG
CTGGTAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGAT
CGAGTCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCAAA
AATCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGT
CGAATTTCTTTGCTGCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCC
ACTGCCCCACCTAGGGATAAAGTTGTCATCTTAGGCGATGGAAATCCAAA
AGCTGTTTATAACAAGGAAGATGATATTGGAACCTATACTATCAAAGCGG
TTGATGATCCCAGAACCTTGAACAAAATCCTTTACATTAAACCCCCTGGT
AATATTTACTCATTCAATGATCTTGTGTCCTTGTGGGAGAGAAAGATTGG
CAAAACCCTCCAAAGGGTGTACGTTCCGGAGGAGCAAGTCCTAAAGAATA
TTCAAGAAGCTGCACCTCCAGTCAATGTGATATTATCAATTCAGCACTCT
GCTTTCGTGAAGGGAGATNCAACCNACTTCCAGNAATGACCCATCGTTGG
NAGTGAAAGCTCGCAGCTCTATCCTGATGTNCAGTACACTACAGTTGATG
AGTATCTCAGTCAGTTTGTGTAAACCCTTCTCTGNTGAGCTGCAGCTTGC
AGGATCTTGGGAAANTAATAAATAANTGGCTTTTGCATCTTTGGTTCTAT
TGTAAGCATTATGGTGTT
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