EY660361

Overview
NameEY660361
Unique NameEY660361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: EUG1_YEAST (Protein disulfide-isomerase EUG1 OS=Saccharomyces cerevisiae GN=EUG1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = 3
Query:  336 KYGVQGYPTIQWFPKGSLE-PKKYEGPRSAEALAEYVNNEGGTNVKIAAVP----SNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAF----TLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKG 740
            KYG+   P  ++     LE P+  +     + + +Y        VK   +P    SNV  +     D+IV D  KDVLV++YA WC H K  AP YE++A       ++ D +++A +D+     L+  + V+G+PT+  +P G
Sbjct:  323 KYGLPQLPEEEY---AKLEKPQPLDRDMIVQLVKDYREGTAKPIVKSEEIPKEQKSNVYKIVGKTHDDIVHDDDKDVLVKYYATWCIHSKRFAPIYEEIANVLASDESVRDKILIAEVDSGANDILS--FPVTGYPTIALYPAG 461          
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: THIO_SHIFL (Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 3
Query:  492 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGTKMVRNMG 764
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G      +G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: THIO_SALTY (Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 3
Query:  492 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGTKMVRNMG 764
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G      +G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: THIO_SALTI (Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 3
Query:  492 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGTKMVRNMG 764
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G      +G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: THIO_ECOLI (Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 3
Query:  492 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGTKMVRNMG 764
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G      +G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: THIO_ECOL6 (Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 3
Query:  492 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGTKMVRNMG 764
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G      +G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: THIO_ECO57 (Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 3
Query:  492 VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGTKMVRNMG 764
            ++ LT D+FD  VL     +LV+F+A WCG CK +AP  +++A  +  +  + VA L+ D+    A KYG+ G PTL  F  G      +G
Sbjct:    5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEY--QGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 93          
BLAST of EY660361 vs. ExPASy Swiss-Prot
Match: THIO_STRCO (Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 3
Query:  501 LTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKG 740
            +T D+F++ VL   K VLV+F+A WCG C+ +AP+ E +AA +   D + +  L+ D+    A KYGV   PTL  +  G
Sbjct:    8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEY--GDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGG 85          
The following BLAST results are available for this feature:
BLAST of EY660361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
EUG1_YEAST4.276e-1130.56Protein disulfide-isomerase EUG1 OS=Saccharomyces ... [more]
THIO_SHIFL5.585e-1137.36Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV... [more]
THIO_SALTY5.585e-1137.36Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE... [more]
THIO_SALTI5.585e-1137.36Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=... [more]
THIO_ECOLI5.585e-1137.36Thioredoxin-1 OS=Escherichia coli (strain K12) GN=... [more]
THIO_ECOL65.585e-1137.36Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 ... [more]
THIO_ECO575.585e-1137.36Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA ... [more]
THIO_STRCO9.526e-1140.00Thioredoxin OS=Streptomyces coelicolor GN=trxA PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660361 ID=EY660361; Name=EY660361; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGGTAAAAACCAAAATACCTGCACAGGGGGAAAAAAAAAAA
ATAAGAAAGAGAGAAATGGAGAGGTATCAGATCTGGCTAGCTCTAGGCAC
TTTAACCTTGTTCTTCGTATCAGCTCTAGCGGACGATGTCGTTGTGCTAA
CAGAAGACAACTTCGAGAAGGAGGTTGGTCAGGACAGGGGAGCTCTTGTT
GAGTTTTACGCTCCTTGGTGTGGCCACTGTAAAAAGCTTGCTCCAGAGTA
TGAGAAACTTGGTGCAAGCTTTAAGAAAGCAAAGTCTGTCTTGATTGGAA
AGGTGGACTGTGACGAGCATAAGAGCTTATGCAGCAAATATGGTGTTCAA
GGATACCCAACAATTCAATGGTTTCCTAAAGGTTCTTTGGAACCCAAAAA
GTATGAAGGGCCACGATCTGCTGAAGCCCTTGCTGAGTATGTGAATAATG
AAGGAGGAACCAATGTGAAGATAGCTGCAGTCCCATCCAATGTGGTGGTA
CTAACAGCTGATAATTTTGATGAGATAGTTTTGGACAAAAGCAAAGATGT
TTTGGTTGAATTTTATGCACCATGGTGTGGCCATTGCAAAAACCTTGCGC
CTACATATGAAAAGGTGGCAGCCGCATTTACATTGGAAGATGATGTAGTT
GTTGCTAATTTGGATGCTGACAAATACAAGGATCTGGCTGAGAAGTATGG
AGTTAGTGGATTTCCTACATTGAAGTTCTTTCCAAAGGGCACAAAGATGG
TGAGGAATATGGGGGTGGCAGAGATTTGGAAGACTTTGTTCCTTCATCAA
TGAAAAATGTGGCACAGTCGTGATGAAAAGGACACTTACTTCACGGGGGG
TATAGTGCGAGCTAGATGCCTTGGGGAAGGAATTGGT
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