EY660284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30 Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = 2 Query: 62 VNPPNRTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLN 370 + PP RT+ V K GS GRS+D+T F +YHELRS +A MFGL+G LE P S W+LV+VD ENDVLL+GD PW EF+N V CI+ILSP EVQQM + G +LN Sbjct: 847 MKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGMHVLN 949
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.855e-29 Identity = 64/108 (59.26%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 77 RTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNS 400 RTF VYK G+ GRS+DI ++S Y EL+ LARMFG+EG LED R GW+LV+ D E+D+LLLGD PW EFVN V CI+ILSP EVQQM G+ N +P Q S+S Sbjct: 1009 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDGDLGSNVLPNQACSSS 1116
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFS_ORYSJ (Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 68/129 (52.71%), Postives = 87/129 (67.44%), Query Frame = 2 Query: 77 RTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDDYATR----QDSRNLSAG 451 RTF VYK G+ GRS+D+++FS Y EL+ LARMF +EG LE+ R GW+LV+ D E+D+LLLGD PW EFV V CI+ILSP EVQQM G +L N++P + +SS A R Q+S N S G Sbjct: 1027 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWRARCDQNSGNPSNG 1155
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 68 PPNRTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNS 400 P RT+ V K+GS GRS+D+T F Y EL+S + MFGLEG L P SGW+LV+VD E+DVLL+GD PW EFV V CI+ILSP EVQQM + G +LLNS I L S Sbjct: 790 PRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAGINDLKTS 900
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFS_ARATH (Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 2 Query: 77 RTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDD 412 RT+ V K GS GRS+D+T++S Y ELR +LARMFG+EG LEDPL S W+LV+ D END+LL+GD PW EFVN V IKILS EVQQM G+ L ++P +N +C + Sbjct: 958 RTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDGD--LAAIP---TTNQACSE 1064
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27 Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 77 RTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDD 412 RTF V K GS GRS+DIT++ Y ELR +LA MFG++G LEDP R W+LV+VD END+LL+GD PW EFV V IKILS EVQQM G+ L VP Q + S+ DD Sbjct: 940 RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDGD--LGGVPPQTQACSASDD 1049
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27 Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 77 RTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDD 412 RTF V K GS GRS+DIT++ Y ELR +LA MFG++G LEDP R W+LV+VD END+LL+GD PW EFV V IKILS EVQQM G+ L VP Q + S+ DD Sbjct: 940 RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDGD--LGGVPPQTQACSASDD 1049
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27 Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 2 Query: 77 RTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSC 406 RT+ V K GS GRS+D+ ++ Y ELR +LARMFG+EG LEDP S W+LV+VD END+LL+GD PW EFVN V IKILS EVQQM GN VP+ +N +C Sbjct: 1037 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGN--FAGVPV---TNQAC 1141
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 56/115 (48.70%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 56 GQVNPPNRTFVTVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNS 400 G + RT+ V+K G+ GRS+DI ++S Y EL+ ++ARMFG+EG L D R GW+LV+ D E DVLL+GD PW +FV V CI+ILSP E QM G+ + +P Q S+S Sbjct: 991 GPAHQRMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQACSSS 1105
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 41/95 (43.16%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 77 RTFVTVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGN 358 R+ V+K G + GRS+D++KFS+Y EL++EL +MF +G L ++ WQ+V+ D E D++L+GD PW EF + V I I + EVQ+M + N Sbjct: 692 RSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSN 785 The following BLAST results are available for this feature:
BLAST of EY660284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660284 ID=EY660284; Name=EY660284; organism=Citrus sinensis; type=EST; length=711bpback to top |