EY660284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 77 RTFVTVYKSGS-FGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSS 403 R V+K GS GR++D+++ + Y +L EL R+F +EG L DP GW++++ D END++++GD PW +F N VW I + + EV+ L + ++ S Sbjct: 665 RICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDP-EKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCLEQAALMMEASKS 773
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 59 QVNPPNRTFVTVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM 343 Q N +R+ V+K G + GRS+D+TKF+ Y EL +EL +MF G L ++ W +V+ D E D++L+GD PW EF N V I I + EVQ+M Sbjct: 707 QQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKM 801
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 77 RTFVTVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM 343 R+ V+K G + GRS+D+TKF+ Y EL +EL MF G L+ P + W +V+ D E D++L+GD PW EF + V I I + EVQ+M Sbjct: 725 RSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 77 RTFVTVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM 343 R+ V+K G + GRS+D+TKF+ Y EL +EL MF G L+ P + W +V+ D E D++L+GD PW EF + V I I + EVQ+M Sbjct: 725 RSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 44 PENVGQVNPPNRTFVTVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM 343 P++ +R+ V+K G + GRS+D++KF +Y EL +EL R+F G L P + W +V+ D END++L+GD PW EF V I I + EV++M Sbjct: 722 PKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 113 GRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM--GKRGNELLNSVPIQRLSNSSCDDYA 418 GR++D+ Y+EL ++ ++F ++G L R+ W++VF D E D++L+GD PWPEF N V I I S EV++M G + LL V + S D+++ Sbjct: 536 GRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVETTLTTTSKTDNHS 637
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 31/77 (40.26%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 113 GRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQM 343 GR++D+T+ Y +LR +L MF ++G L L+ W++V+ D E+D++L+GD PWPEF + V I I + E +Q+ Sbjct: 561 GRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKK-WKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQL 636
BLAST of EY660284 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 34/100 (34.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 77 RTFVTVYKSGS-FGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNS 373 R+ V+ GS GR++D+T+ Y +L +L MF ++G L + + WQ+V+ D E+D++++GD PW EF V I I +P EV+++ + +N+ Sbjct: 542 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNA 640 The following BLAST results are available for this feature:
BLAST of EY660284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660284 ID=EY660284; Name=EY660284; organism=Citrus sinensis; type=EST; length=711bpback to top |