EY660272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 3.412e-59 Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSG+LQQLDY L+QCQ LVLAPTRELA IEKVMRALGDY G K HAC GGTSVRED+ I QAG HVVVGT Sbjct: 46 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGT 164 HSP 2 Score: 50.0618 bits (118), Expect = 3.412e-59 Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 2 Query: 185 MAGKAPEGXQPEARQXDTKKNEPXATEGQD-XXTSYDEVYDSFDALG 322 MAG APEG Q + RQ D + NE +GQD TSYDEV++SFDA+G Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNE--VLDGQDEFFTSYDEVHESFDAMG 45
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.713e-58 Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQLDYGLV+CQ LVLAPTRELA IEKVMRALGDYLG K HAC GGTSVRED+ I +G HVVVGT Sbjct: 48 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGT 166 HSP 2 Score: 45.0542 bits (105), Expect = 3.713e-58 Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 2 Query: 185 MAGKAPEGXQPEARQXDTKKNEPXAT-EGQDXXTSYDEVYDSFDALG 322 MAG APEG Q +A+ D+K E + E ++ TSYDEV++SFD +G Sbjct: 1 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMG 47
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 8.229e-58 Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQLDYGLV+CQ LVLAPTRELA IEKVMRALGDYLG K HAC GGTSVRED+ I +G HVVVGT Sbjct: 48 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGT 166 HSP 2 Score: 43.8986 bits (102), Expect = 8.229e-58 Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 2 Query: 185 MAGKAPEGXQPEARQXDTKKNEPXAT-EGQDXXTSYDEVYDSFDALG 322 MAG APEG Q +A+ D+K E + ++ TSYDEV++SFD +G Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMG 47
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 4.042e-57 Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQLDYGLV+CQ LVLAPTRELA IEKVMRALGDYLG K HAC GGTSVRED+ I +G HVVVGT Sbjct: 44 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGT 162 HSP 2 Score: 41.5874 bits (96), Expect = 4.042e-57 Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 2 Query: 185 MAGKAPEGXQPEARQXDTKKNEPXATEGQDXXTSYDEVYDSFDALG 322 MAG APEG Q + +Q D K E +D TSYD+V +SFD++G Sbjct: 1 MAGLAPEGSQFDDKQYDKKMQEILT---EDFFTSYDDVCESFDSMG 43
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 8.955e-57 Identity = 99/119 (83.19%), Postives = 107/119 (89.92%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 LQENLLRGIYA+GFEKPSA ++RGIVPFCKGLDVIQQAQ+GTGKTATFCSGILQQLDY +V+CQ LVLAPTRELA IEKVMRALGDYLG K HAC GGTSVRED+ I +G HVVVGT Sbjct: 48 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGT 166 HSP 2 Score: 43.8986 bits (102), Expect = 8.955e-57 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 2 Query: 185 MAGKAPEGXQPEARQXDTKKNEPXAT-EGQDXXTSYDEVYDSFDALG 322 MAG APEG Q +A+ D+K E E ++ TSYDEV++SFD +G Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMG 47
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.656e-55 Identity = 95/119 (79.83%), Postives = 105/119 (88.24%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 LQ +LLRGIYA+GFEKPSA ++RGI+PFCKGLDVIQQAQ+GTGKTATFCSG+LQQLD LVQCQ LVLAPTRELA IEKVMRALGDYLG K AC GGTSVRED+ + Q+G HVVVGT Sbjct: 48 LQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGT 166 HSP 2 Score: 45.4394 bits (106), Expect = 1.656e-55 Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 2 Query: 185 MAGKAPEGXQPEARQXDTKKNEPXATEGQD-XXTSYDEVYDSFDAL 319 MAG A +G Q + RQ DTK N EG++ T+YDEV DSFDA+ Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAM 46
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 4.559e-35 Identity = 73/119 (61.34%), Postives = 92/119 (77.31%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+E LLRGIY +GFEKPSA ++R I+P +G DVI QAQ+GTGKTATF ILQQ+D + +CQ L+LAPTRELA I++V+ ALG+Y+ HAC GGT+VRED I ++G HVVVGT Sbjct: 37 LREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGT 155
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33 Identity = 76/120 (63.33%), Postives = 91/120 (75.83%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQA-GGHVVVGT 680 L+E+LLRGIYA+GFEKPSA ++R I+P KG DVI QAQ+GTGKTATF ILQQL+ L + Q LVLAPTRELA I+KV+ ALGDY+G HAC GGT+VR + QA H+VVGT Sbjct: 40 LKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGT 159
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.578e-33 Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LLRGIYA+GFE+PSA ++R I+P KG DVI QAQ+GTGKTATF +LQ++D + QCQ L+LAPTRELA I+KV+ A+GD++ + HAC GGTSVR+D Q G VVVGT Sbjct: 30 LKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGT 148 HSP 2 Score: 22.3274 bits (46), Expect = 2.578e-33 Identity = 11/28 (39.29%), Postives = 15/28 (53.57%), Query Frame = 2 Query: 263 EGQDXXTSYDEVYDSFDALGTAGKPFEG 346 EGQ ++YDE DSFD + + G Sbjct: 11 EGQ-IESNYDETVDSFDEMNLKSELLRG 37
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.357e-33 Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LLRG+YA+GFE+PSA ++R I+P KG DVI QAQ+GTGKTATF +LQ+LD + QCQ L+LAPTRELA I+KV+ A+GD++ + HAC GGTSVR+D Q G VVVGT Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGT 150 HSP 2 Score: 21.9422 bits (45), Expect = 3.357e-33 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 263 EGQDXXTSYDEVYDSFDAL 319 EGQ ++YDE DSFD + Sbjct: 13 EGQ-IESNYDETVDSFDTM 30 The following BLAST results are available for this feature:
BLAST of EY660272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660272 ID=EY660272; Name=EY660272; organism=Citrus sinensis; type=EST; length=933bpback to top |