EY660272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.528e-25 Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLG-GKGHACG---GGTSVREDKGICQAGGHVVVGT 680 L +NLLRGIY+ GFEKPS+ ++R IVPF +G D+I QAQ+GTGKT F G+LQ+LD+ QGLVL+PTRELA +V+ +G++L G C GGT V++D Q+G V VGT Sbjct: 33 LHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELAMQTAEVITRIGEFLAEGSSSFCATFVGGTRVQDDYRKLQSGTIVAVGT 155
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.528e-25 Identity = 63/120 (52.50%), Postives = 80/120 (66.67%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVRED-KGICQAGGHVVVGT 680 L+E LLRGIY++GFE PSA + R I G DVI QAQ+GTGKTATF G+LQ +D Q LVL+PTRELA I KV+ LGDY+ K +A GG ++++D K I + G V+ GT Sbjct: 30 LKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDDLKKIQKHGCQVISGT 149
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 1.244e-24 Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVRED-KGICQAGGHVVVGT 680 L ENLLRG++ +GFE+PSA ++R I+P +G DV+ QAQ+GTGKT TF LQ++D + Q L+LAPTRELA I+KV+ AL ++ K HAC GGTS ED +G+ A +VVGT Sbjct: 29 LDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRDA--QIVVGT 146
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.244e-24 Identity = 63/120 (52.50%), Postives = 84/120 (70.00%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVRED-KGICQAGGHVVVGT 680 L ENLLRG++ +GFE+PSA ++R I+P +G DV+ QAQ+GTGKT TF LQ++D + Q L+LAPTRELA I+KV+ AL ++ K HAC GGTS ED +G+ A +VVGT Sbjct: 29 LDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRDA--QIVVGT 146
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.244e-24 Identity = 58/119 (48.74%), Postives = 82/119 (68.91%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ N++RGI+ +G+E PSA ++R I+P +G DV+ QAQ+GTGKTATF LQ++D L Q L+LAPTRELA I+ V+ +G YL HA GGTS+++D ++G +VVGT Sbjct: 29 LKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENLKATQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGT 147
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.625e-24 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVRED-KGICQAGGHVVVGT 680 L E LLRG++ +GF KPSA ++R I+P +G DV+ QAQ+GTGKT TF LQ++D + Q L+LAPTRELA I+KV+ ALG ++ K HAC GGTS ED +G+ A +VVGT Sbjct: 30 LNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDA--QIVVGT 147
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.621e-24 Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 ++E++LRG+Y +GFEKPSA ++R ++P +G DVI QAQ+GTGKT+ + Q +D + Q L+L+PTRELA EK ++A+G + + HAC GG SV ED + G HVV GT Sbjct: 42 IKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGT 160
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.729e-24 Identity = 58/119 (48.74%), Postives = 82/119 (68.91%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ N++RGI+ +G+E PSA ++R I+P +G DV+ QAQ+GTGKTATF LQ++D Q L+LAPTRELA I+ V+ ++G YL HA GGTS+++D ++G VVVGT Sbjct: 30 LKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGT 148
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.176e-24 Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ N++RGI+ +G+E PSA ++R I+P +G DV+ QAQ+GTGKTATF LQ++D Q L+LAPTRELA I+ V+ +G YL HA GGTS+++D ++G +VVGT Sbjct: 30 LKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGT 148
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.066e-24 Identity = 60/120 (50.00%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGG-HVVVGT 680 L+++LLRGIY +GFE PSA + R I G DVI QAQ+GTGKTATF G+LQ +D Q LVL+PTRELA I +V+ LGDY+ + +A GG ++++D Q G VV GT Sbjct: 30 LKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDDLNRMQKNGCQVVSGT 149 The following BLAST results are available for this feature:
BLAST of EY660272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660272 ID=EY660272; Name=EY660272; organism=Citrus sinensis; type=EST; length=933bpback to top |