EY660272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_NEUCR (ATP-dependent RNA helicase dhh-1 OS=Neurospora crassa GN=dhh-1 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15 Identity = 48/121 (39.67%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 ++ +LL GI+ GFEKPS +E I G D++ +A+ GTGKTA F L +++ + + Q L+L PTRELA +V + LG +LG GGT +R+D Q H+VVGT Sbjct: 50 FIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGT 170
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_BOTFB (ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) GN=dhh1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15 Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 ++ LL GI+ G+EKPS +E I G D++ +A+ GTGKTA F L++++ + Q L+L PTRELA +V + LG +LG GGT++R+D Q H++VGT Sbjct: 54 IKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHLGINVMVTTGGTTLRDDILRLQEPVHIIVGT 172
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 + L+ LL GIY GFE+PS +E I G D++ +A+ GTGKTA FC +L+++D Q +++ PTRELA +V + LG +L + GGTS+++D H++VGT Sbjct: 136 YFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGT 256
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LL GI+ GFEKPS +E I G D++ +A+ GTGKTA+F LQQ+ L + Q L+L PTRELA +V++ LG +L + GGT +R+D H++VGT Sbjct: 36 LKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHLKLQCMVTTGGTLLRDDVMRLDEPVHILVGT 154
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LL GI+ GFEKPS +E I G D++ +A+ GTGKTA F L+++ L + Q L++ PTRELA +V+R LG + G GGT++R+D HV+VGT Sbjct: 38 LKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVSCMVTTGGTNLRDDILRLNETVHVLVGT 156
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.012e-15 Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LL GI+ GFEKPS +E I G D++ +A+ GTGKTA F L+++ L + Q L++ PTRELA +V+R LG + G GGT++R+D H++VGT Sbjct: 43 LKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHILVGT 161
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.240e-15 Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LL GI+ GFEKPS +E I G D++ +A+ GTGKTA F L+++ L + Q L++ PTRELA +V+R LG + G GGT++R+D H++VGT Sbjct: 53 LKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGT 171
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.240e-15 Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L+ LL GI+ GFEKPS +E I G D++ +A+ GTGKTA F L+++ L + Q L++ PTRELA +V+R LG + G GGT++R+D H++VGT Sbjct: 53 LKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGT 171
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DHH1_SCHPO (Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe GN=ste13 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.240e-15 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 + L+ LL GI+ GFE+PS +E I G D++ +A+ GTGKTA F L+++D + Q L+L PTRELA +V + LG ++ K GGT++R+D H+VVGT Sbjct: 49 YYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGT 169
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.844e-15 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 + L+ LL GIY GFE+PS +E I G D++ +A+ GTGKTA FC L+++D Q ++L PTRELA +V + LG +L + GGTS+++D H++VGT Sbjct: 129 YFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLLVGT 249 The following BLAST results are available for this feature:
BLAST of EY660272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660272 ID=EY660272; Name=EY660272; organism=Citrus sinensis; type=EST; length=933bpback to top |