EY660272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: UAP56_MOUSE (Spliceosome RNA helicase Bat1 OS=Mus musculus GN=Bat1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQL+ Q LV+ TRELA I K Y+ K GG S+++D+ + + H+VVGT Sbjct: 50 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: UAP56_MACMU (Spliceosome RNA helicase BAT1 OS=Macaca mulatta GN=BAT1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQL+ Q LV+ TRELA I K Y+ K GG S+++D+ + + H+VVGT Sbjct: 50 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: UAP56_HUMAN (Spliceosome RNA helicase BAT1 OS=Homo sapiens GN=BAT1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQL+ Q LV+ TRELA I K Y+ K GG S+++D+ + + H+VVGT Sbjct: 50 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: UAP56_CANFA (Spliceosome RNA helicase BAT1 OS=Canis familiaris GN=BAT1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQL+ Q LV+ TRELA I K Y+ K GG S+++D+ + + H+VVGT Sbjct: 50 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: UAP56_BOVIN (Spliceosome RNA helicase BAT1 OS=Bos taurus GN=BAT1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQL+ Q LV+ TRELA I K Y+ K GG S+++D+ + + H+VVGT Sbjct: 50 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DDX20_MOUSE (Probable ATP-dependent RNA helicase DDX20 OS=Mus musculus GN=Ddx20 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 321 VLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAGGHVVVGT 680 +L +L G+ A GFE+PS + + I GLD+I QA++GTGKT F + L L Q L+LAPTRE+A I V+ A+G + G + H GGT + +DK + H+ VG+ Sbjct: 69 LLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVGS 188
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DDX39_MOUSE (ATP-dependent RNA helicase DDX39 OS=Mus musculus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.996e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQ++ Q LV+ TRELA I K Y+ K GG S+++D+ + + HVVVGT Sbjct: 49 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGT 171
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: UAP56_CHICK (Spliceosome RNA helicase BAT1 OS=Gallus gallus GN=BAT1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQL+ Q LV+ TRELA I K Y+ K GG +V++D+ + + H+VVGT Sbjct: 50 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGT 172
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: RRP3_KLULA (ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis GN=RRP3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11 Identity = 39/119 (32.77%), Postives = 58/119 (48.74%), Query Frame = 3 Query: 324 LQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGGKGHACGGGTSVREDKGICQAGGHVVVGT 680 L L+ + KP+ + + I P KG D+I AQ G+GKTA F IL QL + +LAPTRELA I++ +LG +G + GG S+ + H+++ T Sbjct: 74 LVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPHIIIAT 192
BLAST of EY660272 vs. ExPASy Swiss-Prot
Match: DDX39_RAT (ATP-dependent RNA helicase DDX39 OS=Rattus norvegicus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 318 WVLQENLLRGIYAFGFEKPSASEERGIVPFCKGLDVIQQAQAGTGKTATFCSGILQQLDYGLVQCQGLVLAPTRELAGLIEKVMRALGDYLGG-KGHACGGGTSVREDKGICQAG-GHVVVGT 680 ++L+ LLR I GFE PS + I G+DV+ QA++G GKTA F LQQ++ Q LV+ TRELA I K Y+ K GG S+++D+ + + HVVVGT Sbjct: 49 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGT 171 The following BLAST results are available for this feature:
BLAST of EY660272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660272 ID=EY660272; Name=EY660272; organism=Citrus sinensis; type=EST; length=933bpback to top |