EY660265

Overview
NameEY660265
Unique NameEY660265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.590e-27
Identity = 69/196 (35.20%), Postives = 116/196 (59.18%), Query Frame = 2
Query:  152 FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG--VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSSQE 733
            F ++ GY  Q+D   P++TV E+L + A L++P DV  + +   +++I++ + LN    +LVG     + G+S  +R+R+TI++EL+  PS+I +DEPTSGLDA  +  VM  ++    +GRT++CTIHQP  +I++ FD L L+  G   IY G     ++  + YF A        +  NPA + L++ ++  E
Sbjct:  193 FKKLCGYVTQSDSLMPSLTVRETLNFYAQLKMPRDVPLKEKLQRVQDIIDEMGLNRCADTLVGTADNKIRGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAKSGRTIICTIHQPRSNIYDMFDNLLLLGDGN-TIYYG----KANKALEYFNA--NGYHCSEKTNPADFFLDLINTQVE 381          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.300e-27
Identity = 80/235 (34.04%), Postives = 133/235 (56.60%), Query Frame = 2
Query:  125 SGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSSQELALGVDFTDIYKGSXLYMRNKALIEELSKPAP 829
            +G P++  TF ++S Y  Q+D+  P++TV E+++ SA L+L      E ++  + EI+  + L     +   L     LS  QRKRL IA+ELV NP ++F DEPTSGLD+ +   V+  +++    GRT++CTIHQPS  +FE FD+L+++ +G   I+ G +    ++LI Y + + G++     +NPA +++EV+S        + F  +  G       K+  E+   PAP
Sbjct:  130 NGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEK--QEVKKELVTEILTALGLMSCSHTRTAL-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYILSQGQC-IFKGVV----TNLIPYLKGL-GLH-CPTYHNPADFIIEVASGEYGDLNPMLFRAVQNGLCAMAEKKSSPEKNEVPAP 350          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 68/208 (32.69%), Postives = 121/208 (58.17%), Query Frame = 2
Query:   98 RIYYWVTPQSGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSS 721
            ++ Y   P SG  K++      +G+  Q+D+  P++TV+E+L ++A LRLP  +  + +   ++ ++  + LN    S++G P   G+S  ++KR++I  E++ NPS++ +DEPTSGLD+  A  ++ T++     GRTVV TIHQPS  I+  FD++ L+  G   IY G     +S  + YF ++     +    NPA  +L++++
Sbjct:  123 KVMYNGQPFSGCIKRR------TGFVAQDDVLYPHLTVWETLFFTALLRLPSSLTRDEKAEHVDRVIAELGLNRCTNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLASGGRTVVTTIHQPSSRIYHMFDKVVLLSEGS-PIYYGA----ASSAVEYFSSLGFSTSLT--VNPADLLLDLAN 317          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26
Identity = 68/188 (36.17%), Postives = 116/188 (61.70%), Query Frame = 2
Query:  158 RISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSS 721
            R +G+  Q+D+  P++TV E+L Y+A LRLP ++  + +   +E ++  + L     S++G   + G+S  +RKR++I  E++ NPS++ +DEPTSGLD+  AA ++ T+R+    GRTVV TIHQPS  ++  FD++ ++   G  IY G  GR    ++ YF +I G        NPA ++L++++
Sbjct:  155 RKTGFVTQDDVLYPHLTVMETLTYTALLRLPKELTRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSRLYRMFDKVLVLSE-GCPIYSGDSGR----VMEYFGSI-GYQPGSSFVNPADFVLDLAN 336          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 6.180e-26
Identity = 73/199 (36.68%), Postives = 118/199 (59.30%), Query Frame = 2
Query:  125 SGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSS 721
            +G P+    F ++S Y  Q+D+  P++TV E+++ SA L+L      E RR  ++EI+  + L     +  G      LS  QRKRL IA+ELV NP ++F DEPTSGLD+ +   V+  ++     GR+++CTIHQPS  +FE FD+L+++ +G   +Y G +     +L+ Y   + G+N     +NPA +++EV+S
Sbjct:  146 NGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQEK--DEGRREMVKEILTALGLLSCANTRTG-----SLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKLFELFDQLYVLSQGQC-VYRGKV----CNLVPYLRDL-GLN-CPTYHNPADFVMEVAS 330          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.072e-26
Identity = 70/224 (31.25%), Postives = 131/224 (58.48%), Query Frame = 2
Query:  167 GYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSS-QELALGVDFTDIYKGSXLYMRNKALIEELSKPAPSS 835
            G+  Q+D+  P++TV E+L Y+A LRLP  +  E ++    ++++ + L   + +++G   V G+S  +RKR++I  E++ NPS++ +DEPTSGLD+  A   +  + +  + G+TV+ TIHQPS  +F  FD+L L+ RG   +Y G     SS  + YF +I G + +    NPA ++L++++ +  ++++  +  D      + + N     +  KP+P++
Sbjct:  239 GFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTILMLHDIAEAGKTVITTIHQPSSRLFHRFDKLILLGRGSL-LYFG----KSSEALDYFSSI-GCSPL-IAMNPAEFLLDLANGNINDISVPSELDD-----RVQVGNSGRETQTGKPSPAA 450          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ADP1_YEAST (Probable ATP-dependent permease OS=Saccharomyces cerevisiae GN=ADP1 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25
Identity = 66/199 (33.17%), Postives = 120/199 (60.30%), Query Frame = 2
Query:  125 SGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA-RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVS 718
            +G    +++F++I G+ +Q+D   P +TV+E++L SA LRLP  +  E ++  + +++E + +  ++  ++G     G+S  +++R++IA ELV +P ++F+DEPTSGLDA  A  ++   VR + D  RT+V +IHQP  +IF  FD+L L+ +G   +Y G   + S  L +     P      D YN A ++++++
Sbjct:  452 NGISMDRKSFSKIIGFVDQDDFLLPTLTVFETVLNSALLRLPKALSFEAKKARVYKVLEELRIIDIKDRIIGNEFDRGISGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSSDYNRTLVLSIHQPRSNIFYLFDKLVLLSKGEM-VYSGNAKKVSEFLRNEGYICP------DNYNIADYLIDIT 643          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCGO_DICDI (ABC transporter G family member 24 OS=Dictyostelium discoideum GN=abcG24 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.269e-24
Identity = 57/152 (37.50%), Postives = 98/152 (64.47%), Query Frame = 2
Query:  146 ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR----NTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 589
            + F RISGY  Q+DI    +T  E L+++A L+LP ++  E ++  +  ++E + L  +  + +G     G+S  +R+RL+IA EL+ +PSI+F+DEPTSGLD+ +A+ ++  ++    N+    RT++ +IHQPS ++FE FD L L+ +G
Sbjct:  532 KNFKRISGYVTQDDIQIGTLTCREHLMFAALLKLPENMSLEIKQQRVASVLEELGLTRVADNPIGTSEKRGISGGERRRLSIATELIVDPSILFIDEPTSGLDSHSASELITKLKQLANNSTKGQRTIIFSIHQPSAELFEQFDNLILLHQG 683          

HSP 2 Score: 21.557 bits (44), Expect = 1.269e-24
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3
Query:   60 TT*MDVLAGRKTGGYITG 113
            T+ +D+L+GRK  G I G
Sbjct:  504 TSLLDILSGRKNVGNIDG 521          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: WBC30_ARATH (Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.271e-24
Identity = 59/189 (31.22%), Postives = 111/189 (58.73%), Query Frame = 2
Query:  149 TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEV 715
            ++ +I+G+  Q+D+   N+TV E+L +SA  RL   +    + + +E ++E + L  +R SLVG     G+S  QRKR+ + VE+V  PS++ +DEPT+GLD+ ++ +++R +R     G  +   +HQPS  +++ FD++ ++ +GG  +Y G + +    +  YF  I G+  + D  NP    +++
Sbjct:  536 SYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKADKVLIIERVIESLGLQHVRDSLVGTIEKRGISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLLRALRREALEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVYHGSVKK----IEEYFADI-GIT-VPDRVNPPDHYIDI 718          

HSP 2 Score: 21.1718 bits (43), Expect = 1.271e-24
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:   60 TT*MDVLAGRKTGGYITGLL 119
            TT +  LAG+ TG   TGL+
Sbjct:  506 TTFLSALAGKATGCTRTGLI 525          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.522e-24
Identity = 77/230 (33.48%), Postives = 128/230 (55.65%), Query Frame = 2
Query:  164 SGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGY------NPATWMLEV---SSSSQELALGVDF--TDIYKGSXLYMRNKALIEELSK 820
            SGY  Q+D+    +TV E+L +SA LRLP  + +  +   +  +++ + L+ +  S VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+  G   ++ GP    +   + YFE+         GY      NPA + L++    S++  L    DF  T+I + S    R+K L+E+L++
Sbjct:  121 SGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRL-MFHGP----AQEALGYFESA--------GYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPS---KRDKPLVEKLAE 334          
The following BLAST results are available for this feature:
BLAST of EY660265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
ABCG1_DICDI5.590e-2735.20ABC transporter G family member 1 OS=Dictyostelium... [more]
ABCG4_HUMAN7.300e-2734.04ATP-binding cassette sub-family G member 4 OS=Homo... [more]
AB14G_ARATH2.124e-2632.69ABC transporter G family member 14 OS=Arabidopsis ... [more]
AB21G_ARATH3.623e-2636.17ABC transporter G family member 21 OS=Arabidopsis ... [more]
ABCG1_HUMAN6.180e-2636.68ATP-binding cassette sub-family G member 1 OS=Homo... [more]
AB22G_ARATH8.072e-2631.25ABC transporter G family member 22 OS=Arabidopsis ... [more]
ADP1_YEAST5.232e-2533.17Probable ATP-dependent permease OS=Saccharomyces c... [more]
ABCGO_DICDI1.269e-2437.50ABC transporter G family member 24 OS=Dictyosteliu... [more]
WBC30_ARATH1.271e-2431.22Putative white-brown complex homolog protein 30 OS... [more]
ABCG2_MACMU1.522e-2433.48ATP-binding cassette sub-family G member 2 OS=Maca... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660265 ID=EY660265; Name=EY660265; organism=Citrus sinensis; type=EST; length=889bp
TCTGGTACCCTGCGGTCCGGTCCGGAATTCCTTCTAAACCACGTGTCCGG
TGCTGGTATACCACTTAAATGGATGTTCTTGCGGGCAGGAAAACAGGCGG
ATATATTACTGGGTTACTCCCCAATCTGGTTACCCAAAGAAGCAAGAAAC
ATTTGCTCGTATTTCTGGATACTGTGAGCAAAATGACATCCACTCTCCTA
ATGTCACTGTGTATGAATCCTTGCTCTACTCAGCCTGGCTCCGTTTACCA
CCTGATGTTGATTCTGAAACCAGAAGGATGTTTCTAGAGGAAATCATGGA
GCTTGTGGAGTTGAATCCATTGAGACAATCACTTGTTGGCTTGCCTGGTG
TAAGTGGTCTGTCGACAGAGCAGCGTAAGAGGCTTACCATTGCAGTTGAG
CTCGTGGCTAACCCATCCATCATATTTATGGATGAGCCAACTTCAGGGCT
TGATGCAAGAGCTGCTGCAATTGTTATGAGAACTGTGAGAAACACGGTGG
ACACTGGAAGGACGGTAGTATGCACCATCCACCAACCAAGCATCGATATA
TTTGAAGCTTTTGATGAGCTATTTTTAATGAAGCGAGGAGGATATGAGAT
TTATGTTGGGCCATTGGGTCGCCATTCTAGCCATCTTATCAGTTATTTCG
AAGCTATTCCTGGAGTCAATAAAATAAAAGATGGTTACAATCCGGCAACT
TGGATGTTGGAAGTTAGTTCTTCATCTCAAGAATTAGCTCTGGGNGTTGA
TTTTACTGATATTTACAAAGGCTCANAACTGTATATGAGAAACAAAGCAC
TCATTGAAGAATTAAGCAAGCCTGCTCCAAGTTCAAGAGACTCTATTTTT
CTACTCAGGACTCACAGNCATTTTTCACCCATGTATGGC
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