EY660265

Overview
NameEY660265
Unique NameEY660265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.391e-24
Identity = 66/184 (35.87%), Postives = 109/184 (59.24%), Query Frame = 2
Query:  164 SGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEV 715
            SGY  Q+D+    +TV E+L +SA LRLP  + S  +   + ++++ + L+ +  S VG   + G+S  +RKR +IA+EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+  G   ++ GP    +   + YF AI    + +   NPA + L++
Sbjct:  120 SGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRL-MFHGP----AQEALGYFGAIG--FRCEPYNNPADFFLDI 296          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.391e-24
Identity = 60/158 (37.97%), Postives = 93/158 (58.86%), Query Frame = 2
Query:  137 KKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 610
            KK      +  Y  Q D+    +TV E++ YSA LRLP D+  E     +E  +  + L      ++G     G+S  +RKR++IA+E++  P I+F+DEPTSGLD+ +A  V++ +RN    GRTV+ ++HQPS ++F  FD+LFL+   G  +Y G
Sbjct:   95 KKARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGRTVISSVHQPSSEVFALFDDLFLLS-SGESVYFG 251          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.675e-24
Identity = 79/231 (34.20%), Postives = 129/231 (55.84%), Query Frame = 2
Query:  146 ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVG--LPG---VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEVSSSSQELALGVDFTDIYKGSXLYMRNKALIEELSKP 823
            E + +   Y  Q D+     TV+E+L + A L+LP   + E  +  +E+I+E + L     S +G  LPG   + GLS  +++R++I   LV NPS+IF+DEPTSGLD+ AA  +M+T+ N    G TV+C+IHQP  +IF  F+++ ++ +G   IY G      S+++ YFE++       +  NPA + L+   S+ E+  G  +T+I         N+ L+ E+  P
Sbjct:  126 EAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPGVSEIEKIKR-VEQIIEDIGLTKRTHSKIGGVLPGGILMKGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVICSIHQPRPEIFALFNKVMVIIKGKM-IYSG------SNILEYFESLG--YPCPNNTNPADFCLD---SAVEIGEGERYTEICNQWQKIWENE-LLNEIEYP 342          

HSP 2 Score: 23.483 bits (49), Expect = 3.675e-24
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:   60 TT*MDVLAGRKTGGYITGLL 119
            +T +D+LA RK+ G ITG L
Sbjct:   98 STLLDILAQRKSTGKITGQL 117          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24
Identity = 71/187 (37.97%), Postives = 105/187 (56.15%), Query Frame = 2
Query:  158 RISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGL-PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEV 715
            RISGY  Q+D+   ++TV E L + A LRL   V  E RR+ ++E++E   L    Q+ +G       LS  +RKRL  AVEL+ NP I+F DEPT+GLD+ +A  ++ T+      G T++CTIHQPS  +F+ F+ + L+  G       P      H +S+F A  G     + YNPA +++ V
Sbjct:  148 RISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSP-----QHALSFF-ANHGY-YCPEAYNPADFLIGV 327          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24
Identity = 61/198 (30.81%), Postives = 111/198 (56.06%), Query Frame = 2
Query:  125 SGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEV 715
            +G+P   +       Y +Q+D+   ++T  E L++ A +R+P  +  + +   ++++++ + L   + +++G+PG V GLS  +RKRL  A E + +P ++  DEPTSGLD+  AA V++ ++     G+TV+ TIHQPS ++FE FD++ LM  G       P+       + +F  I    +    YNPA + ++V
Sbjct:  151 NGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLIKCQNTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAASVVQVLKKLSQRGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPV-----EAVDFFSFIGA--QCPTNYNPADFYVQV 341          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24
Identity = 67/184 (36.41%), Postives = 109/184 (59.24%), Query Frame = 2
Query:  164 SGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEV 715
            SGY  Q+D+    +TV E+L +SA LRLP  + +  +   +  +++ + L+ +  S VG   + G+S  +RKR +IA+EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+  G   ++ GP    +   + YF +I G N  +   NPA + L+V
Sbjct:  121 SGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINMVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRL-MFHGP----AREALGYFASI-GYN-CEPYNNPADFFLDV 297          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: WHITE_DROME (Protein white OS=Drosophila melanogaster GN=w PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 61/198 (30.81%), Postives = 109/198 (55.05%), Query Frame = 2
Query:  125 SGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGYNPATWMLEV 715
            +G P   +       Y +Q+D+   ++T  E L++ A +R+P  +    R   ++++++ + L+  + +++G+PG V GLS  +RKRL  A E + +P ++  DEPTSGLD+  A  V++ ++     G+TV+ TIHQPS ++FE FD++ LM  G       P     S  + +F  +    +    YNPA + ++V
Sbjct:  162 NGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTP-----SEAVDFFSYVGA--QCPTNYNPADFYVQV 352          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: ABCG2_HUMAN (ATP-binding cassette sub-family G member 2 OS=Homo sapiens GN=ABCG2 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 76/257 (29.57%), Postives = 125/257 (48.64%), Query Frame = 2
Query:  164 SGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYFEAIPGVNKIKDGY------NPATWMLE----------------------VSSSSQELALGVDFTDIYKGSXLYMRNKALIEELSKPAPSSRDSIF 850
            SGY  Q+D+    +TV E+L +SA LRL   + +  +   +  +++ + L+ +  S VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+  G   ++ GP    +   + YFE+         GY      NPA + L+                      +  S Q+  L     +IY  S  Y   KA + +LS      + ++F
Sbjct:  121 SGYVVQDDVVMGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGRL-MFHGP----AQEALGYFESA--------GYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKQDKPLIEKLAEIYVNSSFYKETKAELHQLSGGEKKKKITVF 364          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: AB7G_ARATH (ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 60/160 (37.50%), Postives = 95/160 (59.38%), Query Frame = 2
Query:  170 YCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSSHLISYF 649
            +  Q D+    +TV E+L ++A L+LP    +E R  ++  ++  + L     S VG   V G+S  ++KRL++A EL+A+PS+IF DEPT+GLDA  A  VM T++     G TV+C+IHQP   ++  FD++ L+  G   +Y GP G+     ++YF
Sbjct:  153 FVRQEDLFFSQLTVRETLSFAAELQLPEISSAEERDEYVNNLLLKLGLVSCADSCVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLQKLAQDGHTVICSIHQPRGSVYAKFDDIVLLTEGTL-VYAGPAGKEP---LTYF 308          
BLAST of EY660265 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 61/158 (38.61%), Postives = 95/158 (60.13%), Query Frame = 2
Query:  137 KKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPPDVDSETRRMFLEEIMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 610
            KK+      + Y  Q D+    +TV ES+ YSA LRLP  +  E     +E  +  + L       +G   + G+S  ++KRL+IA+E++  PS++F+DEPTSGLD+ +A  V++ +RN   +G+TVV +IHQPS ++F  FD+L L+  GG  +Y G
Sbjct:   80 KKRRLDFGAAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNIASSGKTVVSSIHQPSGEVFALFDDLLLLS-GGETVYFG 236          
The following BLAST results are available for this feature:
BLAST of EY660265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
ABCG2_BOVIN3.391e-2435.87ATP-binding cassette sub-family G member 2 OS=Bos ... [more]
AB15G_ARATH3.391e-2437.97ABC transporter G family member 15 OS=Arabidopsis ... [more]
ABCGC_DICDI3.675e-2434.20ABC transporter G family member 12 OS=Dictyosteliu... [more]
SCRT_DROME4.429e-2437.97Protein scarlet OS=Drosophila melanogaster GN=st P... [more]
WHITE_LUCCU5.784e-2430.81Protein white OS=Lucilia cuprina GN=W PE=2 SV=2[more]
ABCG2_PIG7.555e-2436.41ATP-binding cassette sub-family G member 2 OS=Sus ... [more]
WHITE_DROME9.867e-2430.81Protein white OS=Drosophila melanogaster GN=w PE=1... [more]
ABCG2_HUMAN9.867e-2429.57ATP-binding cassette sub-family G member 2 OS=Homo... [more]
AB7G_ARATH9.867e-2437.50ABC transporter G family member 7 OS=Arabidopsis t... [more]
AB13G_ARATH9.867e-2438.61ABC transporter G family member 13 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660265 ID=EY660265; Name=EY660265; organism=Citrus sinensis; type=EST; length=889bp
TCTGGTACCCTGCGGTCCGGTCCGGAATTCCTTCTAAACCACGTGTCCGG
TGCTGGTATACCACTTAAATGGATGTTCTTGCGGGCAGGAAAACAGGCGG
ATATATTACTGGGTTACTCCCCAATCTGGTTACCCAAAGAAGCAAGAAAC
ATTTGCTCGTATTTCTGGATACTGTGAGCAAAATGACATCCACTCTCCTA
ATGTCACTGTGTATGAATCCTTGCTCTACTCAGCCTGGCTCCGTTTACCA
CCTGATGTTGATTCTGAAACCAGAAGGATGTTTCTAGAGGAAATCATGGA
GCTTGTGGAGTTGAATCCATTGAGACAATCACTTGTTGGCTTGCCTGGTG
TAAGTGGTCTGTCGACAGAGCAGCGTAAGAGGCTTACCATTGCAGTTGAG
CTCGTGGCTAACCCATCCATCATATTTATGGATGAGCCAACTTCAGGGCT
TGATGCAAGAGCTGCTGCAATTGTTATGAGAACTGTGAGAAACACGGTGG
ACACTGGAAGGACGGTAGTATGCACCATCCACCAACCAAGCATCGATATA
TTTGAAGCTTTTGATGAGCTATTTTTAATGAAGCGAGGAGGATATGAGAT
TTATGTTGGGCCATTGGGTCGCCATTCTAGCCATCTTATCAGTTATTTCG
AAGCTATTCCTGGAGTCAATAAAATAAAAGATGGTTACAATCCGGCAACT
TGGATGTTGGAAGTTAGTTCTTCATCTCAAGAATTAGCTCTGGGNGTTGA
TTTTACTGATATTTACAAAGGCTCANAACTGTATATGAGAAACAAAGCAC
TCATTGAAGAATTAAGCAAGCCTGCTCCAAGTTCAAGAGACTCTATTTTT
CTACTCAGGACTCACAGNCATTTTTCACCCATGTATGGC
back to top