EY660263

Overview
NameEY660263
Unique NameEY660263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGB_SHEEP (Glycogen phosphorylase, brain form OS=Ovis aries GN=PYGB PE=2 SV=3)

HSP 1 Score: 55.8398 bits (133), Expect = 1.245e-11
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 3
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVG-EDIFL 506
            PA++LSQ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ G E++F+
Sbjct:  659 PAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFI 711          

HSP 2 Score: 35.039 bits (79), Expect = 1.245e-11
Identity = 23/68 (33.82%), Postives = 31/68 (45.59%), Query Frame = 1
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    +V  Y  + +         FVPR  + GGKA   Y  A  I K +T  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHVVTLYNRIKK----DPTQAFVPRTVMIGGKAAPGYHMAKKIIKLVTSIGDIV 631          
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYGB_BOVIN (Glycogen phosphorylase, brain form OS=Bos taurus GN=PYGB PE=2 SV=3)

HSP 1 Score: 55.8398 bits (133), Expect = 1.245e-11
Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = 3
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVG-EDIFL 506
            PA++LSQ ISTA  EA  T ++KF  NG + +GT+DGAN E+ E+ G E++F+
Sbjct:  659 PAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFI 711          

HSP 2 Score: 35.039 bits (79), Expect = 1.245e-11
Identity = 23/68 (33.82%), Postives = 31/68 (45.59%), Query Frame = 1
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    +V  Y  + +         FVPR  + GGKA   Y  A  I K +T  G  V
Sbjct:  568 VKRIHEYKRQLLNCLHVVTLYNRIKK----DPTQAFVPRTVMIGGKAAPGYHMAKKIIKLVTSIGNIV 631          
BLAST of EY660263 vs. ExPASy Swiss-Prot
Match: PYG_DROME (Glycogen phosphorylase OS=Drosophila melanogaster GN=GlyP PE=2 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 3.535e-11
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 3
Query:  351 PASELSQHISTAWMEARATTDVKFAKNGCMVVGTLDGANGEIREQVGED 497
            PA++LS+ ISTA  EA  T ++KF  NG + +GTLDGAN E+ E++G D
Sbjct:  659 PAADLSEQISTAGTEASGTGNMKFQLNGALTIGTLDGANVEMAEEMGLD 707          

HSP 2 Score: 33.8834 bits (76), Expect = 3.535e-11
Identity = 23/68 (33.82%), Postives = 30/68 (44.12%), Query Frame = 1
Query:   64 LKSIFELERQLMTI*RIVDTYKEMLEMSAVKRNAKFVPRVCIFGGKAFASYVQANTIGKFITDGGATV 267
            +K I E +RQL+    I+  Y  + +       A F PR  + GGKA   Y  A  I K I   G  V
Sbjct:  568 VKRIHEYKRQLLNCLHIITLYNRIKK----DPTANFTPRTIMIGGKAAPGYYVAKQIIKLICAVGNVV 631          
The following BLAST results are available for this feature:
BLAST of EY660263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
PYGB_SHEEP1.245e-1150.94Glycogen phosphorylase, brain form OS=Ovis aries G... [more]
PYGB_BOVIN1.245e-1150.94Glycogen phosphorylase, brain form OS=Bos taurus G... [more]
PYG_DROME3.535e-1153.06Glycogen phosphorylase OS=Drosophila melanogaster ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660263 ID=EY660263; Name=EY660263; organism=Citrus sinensis; type=EST; length=918bp
ACTGGTCGCCTGCGGTACTGGTCCGGAATTTTTTCAAAGACGGCGTGTCC
GATGACATCCTGTCTGAAGAGCATCTTTGAACTCGAGCGACAATTGATGA
CTATCTAGAGAATTGTTGACACATACAAAGAGATGTTAGAAATGAGTGCA
GTAAAAAGGAATGCCAAATTTGTACCAAGAGTTTGTATATTTGGAGGAAA
AGCCTTTGCTAGCTATGTGCAAGCCAATACAATTGGGAAATTTATTACGG
ATGGTGGGGCCACGGTCTGTCTTGGTCCTGAAGATAGGTGACTTATTGAA
GGGAATTTTTGTCCCTGATTACAATGTACGTGAGGCTGAATTGCTTATAG
CCTGCAAGTGAGCTCTCTCAACACATCAGTACTGCCTGGATGGAGGCTAG
AGCTACCACTGACGTGAAATTTGCAAAGAATGGTTGCATGGTGGTTGGAA
CCTTGGATGGTGCCAATGGTGAAATACGGGAACAGGTTGGAGAGGATATC
TTTTTACTATTATGTGACAGAGCCTACGAGATTGCAGGATAGTTATAACA
AAGATCTGAGGGGAAATTTGTTCCCTCACACCGATTTGAAGAATTGCACA
AATTTGCCAGATCAGGTGGTTTTGGGTGTTACTGCTATGATGAATCTATG
GGATCACTGGAACGAAATGAATGCTTTGGCCGTGCACATTATTGCCAACG
AGTGCACAGATTTTCCTAGCTACTTAGAATGCCAAGATAAAGTTTTTGAA
GCGTGTTGCCATCTAAATAGATGGACGAGAATGACGATCATGAACACATC
GTGCTCCTTGAAGATGAACACTAACAGAACGAGTCGGGATTGTGCCCGAA
CATATGGAACTTAATACCCGTGCAATTGCCGAGAACGTGTAATGGGTGTT
CCCAGTAACTGAGNTGGG
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