EY660260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DDX6_DICDI (Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium discoideum GN=ddx6 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.562e-25 Identity = 60/134 (44.78%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 FD + L+ +LLRGI+ G+ KPS IQ++ I G D++ +A++GTGKTA+F L++ D Q L+L PTRELA Q +V + LG Y+ V+V A GGTS+++D L + VH++V TPGRV D+ +K Sbjct: 51 FDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEKTDPTKDVIQVLILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYNPVHILVATPGRVLDLAQK 184
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 58/134 (43.28%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+ D+ +K Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILDLTKK 259
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_SCHPO (Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe GN=ste13 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 F+ L+ LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA F L+++D + Q L+L PTRELA Q +V + LG ++ VKV GGT++R+D L+ VH+VVGTPGRV D+ K Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGK 179
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_PHANO (ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum GN=DHH1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 F+ ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + + QAL+L PTRELA Q +V + LG +LG+ V GGT +++D LS VH++VGTPGR+ D+ K Sbjct: 51 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERVNPKISKTQALILVPTRELALQTSQVCKTLGKHLGINVMVSTGGTGLKDDIIRLSDPVHIIVGTPGRILDLAGK 184
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25 Identity = 58/134 (43.28%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L+++D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH++VGTPGR+ D+ +K Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKK 269
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = 1 Query: 262 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQ 672 +TF+ L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+++ + QAL++ PTRELA Q +V+R LG + G+ GGT++R+D L+ VH++VGTPGRV D+ ++ Sbjct: 34 NTFEDFYLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRK 170
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 F+ ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++ + + + QAL+L PTRELA Q +V + LG +LG+ V GGT +++D LS VH++VGTPGR+ D+ K Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLQDDIIRLSDTVHIIVGTPGRILDLASK 182
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_ASPNC (ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dhh1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.935e-25 Identity = 63/163 (38.65%), Postives = 94/163 (57.67%), Query Frame = 1 Query: 193 DARMNDLLGSDGQDFFTSYDEVYDT----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRK 669 DA+ + L +D ++V T F+ ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++++ + QAL+L PTRELA Q V + LG +LG+ V GGT + +D L+ VH++VGTPGRV D+ K Sbjct: 20 DAKWKEQLNVPAKDARPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASK 182
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNV (ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii GN=VAD1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDM 660 F+ GL+ LL GIY GFE+PS IQ++ I G D++ +A++GTGKTA+F L +++ L QAL+L PTRELA Q +V + LG ++ ++V GGT++R+D L VH++VGTPGR+ D+ Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDL 169
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNE (ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans GN=DHH1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24 Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 268 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDM 660 F+ GL+ LL GIY GFE+PS IQ++ I G D++ +A++GTGKTA+F L +++ L QAL+L PTRELA Q +V + LG ++ ++V GGT++R+D L VH++VGTPGR+ D+ Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDL 169 The following BLAST results are available for this feature:
BLAST of EY660260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660260 ID=EY660260; Name=EY660260; organism=Citrus sinensis; type=EST; length=703bpback to top |