EY660260

Overview
NameEY660260
Unique NameEY660260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A3_BOVIN (Eukaryotic initiation factor 4A-III OS=Bos taurus GN=EIF4A3 PE=2 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 8.712e-48
Identity = 100/151 (66.23%), Postives = 118/151 (78.15%), Query Frame = 1
Query:  232 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681
            +F TS + +V  TFD MGL+E+LLRGIYAYGFEKPSAIQQR I    KG DVI Q+QSGTGKTATF   +LQ LD  + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L  G HVV GTPGRVFDM+R++SLR
Sbjct:   27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLR 177          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.712e-48
Identity = 101/169 (59.76%), Postives = 124/169 (73.37%), Query Frame = 1
Query:  193 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRKQSLRP 684
            D+R  D  G DG +      ++++E+ D+ D M L E+LLRGIYAYGFEKPSAIQQR I+   KG DVI QAQSGTGKTATF   ILQQ++  L   QALVLAPTRELAQQI+KV+ ALGDY+G   HAC+GGT+VR E Q++     H++VGTPGRVFDML ++ L P
Sbjct:    6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSP 173          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.138e-47
Identity = 89/155 (57.42%), Postives = 117/155 (75.48%), Query Frame = 1
Query:  223 DGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687
            D     T+YDEV  +FD +GL++ LLRGIY YGFE PS+IQQR I+P  KG DV+ QAQSGTGKTATF    LQ +D  + + QAL++APTRELA QI+KV+ A G+Y+ ++ HAC+GGTSV ED R++  GVHV+VGTPGR+ DM+ ++ L+ D
Sbjct:    9 DSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIECHACIGGTSVAEDIRVIQEGVHVIVGTPGRIHDMIERRILKTD 163          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.138e-47
Identity = 97/143 (67.83%), Postives = 114/143 (79.72%), Query Frame = 1
Query:  253 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681
            +V  TFDAMGL+E+LLRGIYAY FEKPSAIQQR I+P  +G DVI QAQSGTGKTATF   +LQ +D  L E QALVL+PTRELA QI+ V+ ALGDYL V+ HAC+GGTSV ED R L  G H+V GTPGRV+DM+R++ LR
Sbjct:   21 KVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCHACIGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLR 163          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.535e-47
Identity = 87/149 (58.39%), Postives = 119/149 (79.87%), Query Frame = 1
Query:  241 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLRPD 687
            ++Y++V D+FD+M L+  LLRG+YAYGFE+PSAIQQR I+P  KG DVI QAQSGTGKTATF    LQ++D  L  CQAL++APTRELAQQI+KV+ A+GD++ +  HAC+GGT++R+D + L  G  +VVGTPGR+ DM++++ L+ D
Sbjct:   16 SNYEDVTDSFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQKIDPNLKACQALIVAPTRELAQQIQKVVVAIGDFMNINCHACIGGTAIRDDMKALQEGPPIVVGTPGRIQDMIQRRVLKTD 164          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_GIBZE (ATP-dependent RNA helicase FAL1 OS=Gibberella zeae GN=FAL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 102/176 (57.95%), Postives = 126/176 (71.59%), Query Frame = 1
Query:  157 LAEGSQFDARQFDARMNDLLGSDGQDFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681
            +AEGS  D R+ D RM         +F TS +  V+ TF++M L+ENLLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+R++ LR
Sbjct:    1 MAEGSGID-RKADERM---------EFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLR 166          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: IF4A3_MACFA (Eukaryotic initiation factor 4A-III OS=Macaca fascicularis GN=EIF4A3 PE=2 SV=3)

HSP 1 Score: 186.808 bits (473), Expect = 9.632e-47
Identity = 98/151 (64.90%), Postives = 116/151 (76.82%), Query Frame = 1
Query:  232 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681
            +F TS + +V  TFD MGL+E+LLRGIYAYGFEKPSAIQQR I    KG DVI Q+QSGTGKTATF   +LQ LD  + E QAL+LAP RELA QI+K +  LGDY+ V+ HAC+GGT+V ED R L  G HVV GTPGRVFDM+R++SLR
Sbjct:   27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLR 177          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.803e-46
Identity = 94/142 (66.20%), Postives = 112/142 (78.87%), Query Frame = 1
Query:  256 VYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681
            V  TF+A+ L+E+LLRGIYAY FEKPSAIQQR I+P  +G DVI QAQSGTGKTATF   +LQ +D  L E QALVL+PTRELA QI+ V+ ALGDY+ V  HAC+GGTSV ED R L +G  VV GTPGRVFDM+R+++LR
Sbjct:   21 VAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVSCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLR 162          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_MAGGR (ATP-dependent RNA helicase FAL1 OS=Magnaporthe grisea GN=FAL1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.243e-46
Identity = 100/176 (56.82%), Postives = 126/176 (71.59%), Query Frame = 1
Query:  157 LAEGSQFDARQFDARMNDLLGSDGQDFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681
            +AEGS  D R+ + RM         +F TS +  V+ TF++M L+E+LLRGIYAYG+E PSA+Q R IV  CKG D I QAQSGTGKTATF   +LQ +D  + E QALVL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGT+V ED R L  G H+V GTPGRV DM+R++ LR
Sbjct:    1 MAEGSGID-RKAEERM---------EFTTSKEVTVHPTFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLR 166          
BLAST of EY660260 vs. ExPASy Swiss-Prot
Match: FAL1_COCIM (ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis GN=FAL1 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.243e-46
Identity = 97/151 (64.24%), Postives = 113/151 (74.83%), Query Frame = 1
Query:  232 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRKQSLR 681
            +F TS +  V  TFD M L+ENLLRGIYAYGFE PSAIQ R IV  CKG D I QAQSGTGKTATF   ILQ +D  L E QALVL+PTRELA QI+ V+ A+GDY+ V+ HAC+GGT+V +D R L  G HVV GTPGRV DM+R++ LR
Sbjct:   14 EFTTSKEVTVAPTFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYMNVQCHACIGGTNVGDDIRKLDHGQHVVSGTPGRVADMIRRRHLR 164          
The following BLAST results are available for this feature:
BLAST of EY660260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A3_BOVIN8.712e-4866.23Eukaryotic initiation factor 4A-III OS=Bos taurus ... [more]
IF4A1_PONAB8.712e-4859.76Eukaryotic initiation factor 4A-I OS=Pongo abelii ... [more]
IF4A_YARLI1.138e-4757.42ATP-dependent RNA helicase eIF4A OS=Yarrowia lipol... [more]
FAL1_USTMA1.138e-4767.83ATP-dependent RNA helicase FAL1 OS=Ustilago maydis... [more]
IF4A_ASPTN2.535e-4758.39ATP-dependent RNA helicase eIF4A OS=Aspergillus te... [more]
FAL1_GIBZE5.647e-4757.95ATP-dependent RNA helicase FAL1 OS=Gibberella zeae... [more]
IF4A3_MACFA9.632e-4764.90Eukaryotic initiation factor 4A-III OS=Macaca fasc... [more]
FAL1_CRYNE2.803e-4666.20ATP-dependent RNA helicase FAL1 OS=Cryptococcus ne... [more]
FAL1_MAGGR6.243e-4656.82ATP-dependent RNA helicase FAL1 OS=Magnaporthe gri... [more]
FAL1_COCIM6.243e-4664.24ATP-dependent RNA helicase FAL1 OS=Coccidioides im... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660260 ID=EY660260; Name=EY660260; organism=Citrus sinensis; type=EST; length=703bp
TTCCTCAACCCACGCGTCCGTGAACTCCGTCTCCTCAAAGCAAACAACTA
AACTCAGAGATCCGAGGAGTTCGGGGAAAACCCTATTCCACCCCCTAGTC
TTTAAAATCAAACAAGCTTCCACCTTTCATCATCATCACTATCAGTCATG
GCTGGTTTGGCTGAAGGATCCCAGTTTGATGCCCGTCAATTTGATGCTAG
AATGAATGATTTACTTGGAAGTGATGGACAAGATTTCTTCACATCGTATG
ATGAGGTTTATGATACTTTTGATGCTATGGGATTGCAAGAGAATCTTCTT
AGAGGCATTTATGCATATGGTTTTGAGAAGCCTTCTGCCATTCAGCAAAG
GGGGATTGTTCCATTCTGCAAGGGACTTGATGTAATTCAACAAGCACAGT
CTGGAACTGGAAAAACTGCAACTTTTTGCTCCGGAATTTTGCAGCAGCTT
GATTATGGTTTAGTTGAATGCCAAGCATTGGTTCTTGCTCCAACTAGGGA
ACTGGCGCAACAGATTGAGAAGGTTATGCGAGCACTTGGTGACTATCTTG
GTGTCAAAGTGCATGCATGTGTAGGTGGAACCAGTGTCCGTGAAGATCAA
CGCATTCTTTCAAGCGGTGTACATGTTGTAGTTGGTACACCTGGTCGTGT
GTTTGACATGTTGCGGAAGCAATCTCTTCGCCCAGATACATCANGATCTT
TGT
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