EY660252

Overview
NameEY660252
Unique NameEY660252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_LYSSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Lysinibacillus sphaericus (strain C3-41) GN=dxr PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.941e-36
Identity = 84/193 (43.52%), Postives = 122/193 (63.21%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI--LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            K IS+LG+TGSIG QT DI+ E  + F +VA ++G N+    + +   KP++V+V+ E      ++AL   +E P I    G QG++E A HP +  +V  ++G  GL+ T+AAI  GK IA+ANKETL+  G  V+  A K+N  ILP DSEHSAIFQ + G     + R+I+TASGG+FRD     +K+++
Sbjct:    2 KKISLLGATGSIGWQTYDILKEQREAFQLVAFSSGKNMEKTREMIDNLKPELVSVQLE------EDALLLAKEYPTIHFTFGAQGLVEVATHPASTVLVNAVLGSVGLESTLAAIRMGKTIAIANKETLVTAGHLVMAEAKKYNATILPVDSEHSAIFQSMNGENPKDIERLIITASGGSFRDKTRDQLKHVT 188          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_THEYD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dxr PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36
Identity = 78/191 (40.84%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            K + +LGSTGSIG   L+++ +  DKF V+ LAA S++ +L +Q+K F PQ VAV ++   DE+++ + N+E    IL G +G+ + A+  +A  +++ IVG AGL PT  A++ GK I +ANKE+ +  G  +         KI+P DSEHSA+FQCI G  +  +++I LTASGG FR      ++N++
Sbjct:    2 KKVVILGSTGSIGKNALEVIRKFPDKFKVLGLAAKSSVNILEEQIKEFNPQYVAVFDKKACDELRKKVKNLE----ILKGNEGICKLAKLKEADIILSAIVGAAGLIPTFEAVKEGKTIGVANKESFVMAGELIKKQGKISGAKIIPVDSEHSAVFQCINGCNKPYIKKIWLTASGGPFRGKKSYEIENVT 188          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_SOLUE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Solibacter usitatus (strain Ellin6076) GN=dxr PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36
Identity = 80/191 (41.88%), Postives = 117/191 (61.26%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV----EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNM 806
            K I+VLGSTGSIGT TLD+V  +   + V +L AG NI LL  Q+  F+P++  V + ++LD +  +L        E P++L+G+   + A R P+  TV++ IVG AGL+ T  A+  GK + LANKE L++GG  V+    K   ++LP DSEH+   QC++      + R+ILTASGG FR+ PV  +
Sbjct:    2 KTIAVLGSTGSIGTNTLDVVRRNRHLYEVYSLVAGQNIELLTGQILEFRPKLAVVASAAVLDLLTASLQAAGLPKSEWPDLLSGDAARVAAVRAPEVDTVISAIVGVAGLEATYEAVCLGKRVGLANKEVLVSGGSLVMEAVRKFGAELLPVDSEHNGAHQCLRAGNRAQVSRLILTASGGPFRNTPVSEL 192          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_RALPJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ralstonia pickettii (strain 12J) GN=dxr PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36
Identity = 80/192 (41.67%), Postives = 119/192 (61.98%), Query Frame = 3
Query:  252 ISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI-QGLPEV--ALRRIILTASGGAFRDWPVRNMKNLS 818
            ++VLG+TGSIG  TLD+V  H DK+ V AL A +    LA   + F+P++  + + +  D +++ L       EI +G + + EAA HPD   V+  IVG AGL+PT+AA+ AGK + LANKE L+  G   +    +H   +LP DSEH+AIFQC+ Q +P+    + RI+LTASGG FR   V ++ +++
Sbjct:    4 LTVLGATGSIGDSTLDVVRRHPDKYSVFALTANAQADKLAVLCREFRPKMAVLGSAAAADALRDQLGTEAAGIEICSGTKALEEAAAHPDCDAVMAAIVGAAGLRPTLAAVRAGKRVLLANKEALVMSGALFMDAVREHGATVLPIDSEHNAIFQCLPQQVPQFGRGVSRIVLTASGGPFRTRAVDSLADVT 195          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_PSESM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pseudomonas syringae pv. tomato GN=dxr PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36
Identity = 82/198 (41.41%), Postives = 118/198 (59.60%), Query Frame = 3
Query:  240 GPKPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI-----QGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            GP+ I++LG+TGSIG  TLD+VA H   + V AL   S +  L     +  PQ   V  +    ++++ LA       +L GE G+ E A HP    V+  IVG AGL+PT+AA+EAGK + LANKE L+  G   +    +    +LP DSEH+AIFQC+     +GL  V +RRI+LTASGG FR+ P+  +++++
Sbjct:    3 GPQHITILGATGSIGLSTLDVVARHPTLYQVFALTGFSRLDELLALCIKHTPQYAVVPEQVAARKLQDDLAAAGLDTRVLVGEGGLCEVAAHPMVDAVMAAIVGAAGLRPTLAAVEAGKKVLLANKEALVMSGALFMQAVRQSGAVLLPIDSEHNAIFQCLPGDFARGLGAVGVRRIMLTASGGPFRETPLEQLQDVT 200          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_HAEDU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Haemophilus ducreyi GN=dxr PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36
Identity = 83/191 (43.46%), Postives = 114/191 (59.69%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ----------GLPEVALRRIILTASGGAFRD 788
            K I +LG+TGSIG  TL ++  + D++ V AL  G N+ L+A Q  +FKP+  A+ +E     + E L  +    ++L GEQ + E A HPDA  V+  IVG AGL PT+AA++AGK I LANKE+L+  G   +  A K    +LP DSEH+AIFQ +            L E+ + RIILT SGG FR+
Sbjct:    2 KNIVILGATGSIGQSTLSVIEHNPDQYQVFALVGGKNVELMATQCSQFKPKFAALVDEKAAKLLAEQLKALNLTTQVLTGEQAICELAAHPDANIVMAAIVGAAGLLPTLAAVKAGKQILLANKESLVTCGQIFIDEARKSGATLLPVDSEHNAIFQSLPLVAQQKIGFCPLAELGVSRIILTGSGGPFRE 192          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_LEPIN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Leptospira interrogans GN=dxr PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36
Identity = 76/189 (40.21%), Postives = 117/189 (61.90%), Query Frame = 3
Query:  252 ISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            + +LG++GS+G  TL ++  H +KF + + +  SN+    +  K F P  + V ++     +   L N   + +IL GE  + E  R P+   V+T IVG  GL+PT+AAI AGK + +ANKETL+  GP +  L  KHN K++P DSEH+A+FQ ++ L   ++ +IILTASGGAFRD PV  + +++
Sbjct:    5 VCLLGASGSVGESTLKVLRAHPEKFRLHSFSVHSNLEKAKEIQKEFSPDFICVSSDFADVGV---LGNKLGRTQILYGESSLCELVREPEVEIVITAIVGSVGLRPTIAAITAGKRLGIANKETLVTSGPLIQSLIAKHNTKVVPVDSEHNALFQLLESLNPNSVEKIILTASGGAFRDLPVEQLSSVT 190          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_HALOH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dxr PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36
Identity = 78/191 (40.84%), Postives = 126/191 (65.97%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            K + VLGSTGSIGTQTL++++  ED++ ++AL+A  +  L+  Q ++FKP+ + + NE    E+K  L+++    E+L+G +G+I  +   +A  V+  +VG  GLKPTVAA+++G  + LANKE+L+ GG  +    ++   ++LP DSEH+AIFQ + G  +  + R+ILTASGG F + P    K++S
Sbjct:    3 KKLVVLGSTGSIGTQTLEVLSHLEDQWEILALSANKSTGLIEKQARKFKPRYLVMMNERAALELKHRLSDMSS--EVLSGMEGLITISSLEEADLVINALVGAVGLKPTVAALQSGNTLGLANKESLVIGGEIIKSYLNEEG-RVLPVDSEHNAIFQLLNGHNDKEVERLILTASGGPFLELPRERFKDVS 190          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_DESAP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulforudis audaxviator (strain MP104C) GN=dxr PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36
Identity = 86/181 (47.51%), Postives = 111/181 (61.33%), Query Frame = 3
Query:  243 PKPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFR 785
            PK I+VLGSTGSIG Q LD+V  H +KF VV LAAG N  LLA+Q   F P VV+V +    + ++  L       E+ AGE G+   A  P A  ++  + G  GL PTV AI++GKD+ALANKETL+  G  V  LA    ++ILP DSEHSA++QC        +  ++LTASGG FR
Sbjct:    2 PKRIAVLGSTGSIGRQALDVVRSHPEKFKVVGLAAGRNWELLAEQAAEFAPGVVSVWSGDDAERVRVRLGG---GVEVHAGEPGLSAVATWPAADILLVAVAGTTGLVPTVEAIQSGKDVALANKETLVVAGELVTELALGRGVQILPVDSEHSAVWQC-TAYRRTEVTGVVLTASGGPFR 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_PSEPF (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=dxr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36
Identity = 80/197 (40.61%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  243 PKPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI-----QGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            P+ I+VLG+TGSIG  TLD++A H D++   AL+  + ++ L     R  P+   V        +++ L       ++L GE+G+ + A  P+   V+  IVG AGL+PT+AA+EAGK I LANKE L+  G   +    K    +LP DSEH+AIFQC+     +GL  V +RRI+LTASGG FR  P+  + ++S
Sbjct:    4 PQQITVLGATGSIGLSTLDVIARHPDRYQAFALSGFTRLSELFALCVRHLPEYAVVPEAGAARNLQDDLRAAGLSTQVLVGEEGLCQVAAAPEVDAVMAAIVGAAGLRPTLAAVEAGKKILLANKEALVMSGALFMQAVRKSGSVLLPIDSEHNAIFQCMPQDFARGLSNVGVRRILLTASGGPFRQTPMAELAHVS 200          
The following BLAST results are available for this feature:
BLAST of EY660252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
DXR_LYSSC2.941e-3643.521-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_THEYD3.841e-3640.841-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_SOLUE3.841e-3641.881-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_RALPJ3.841e-3641.671-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PSESM3.841e-3641.411-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_HAEDU3.841e-3643.461-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_LEPIN6.551e-3640.211-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_HALOH6.551e-3640.841-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_DESAP6.551e-3647.511-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_PSEPF8.556e-3640.611-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660252 ID=EY660252; Name=EY660252; organism=Citrus sinensis; type=EST; length=889bp
TTCCAAGACCCACGTGTCCGGGCATTGATGTCAAAAACCCAGCTGAAATC
AAGGCTCTCTCTTTCTTGGAGACAACCAGGTCATATCACCCCCTCCCCAA
GCTCTCAGGTGGGTTTCCTTTGAAGAGGAAGGATAATGCAACGGCGACGT
TTGGTAGAATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGGCCA
GGCCGAGCTGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCC
AATCTCAGTGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACA
TAGTTGCGGAGCATGAAGATAAATTCATAGTTGTGGCACTGGCAGCTGGT
TCAAATATAACTCTTCTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGT
AGTTGCTGTTAGAAATGAGTCATTACTTGATGAAATCAAGGAGGCTTTGG
CTAATGTTGAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTCATT
GAGGCTGCCCGACACCCAGATGCTGTCACCGTGGTGACAGGTATAGTCGG
TTGTGCAGGATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATA
TAGCTTTGGCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTT
CCTCTAGCTCACAAGCATAACATAAAAATTCTTCCAGCTGATTCAGAACA
TTCTGCCATATTTCAGTGTATTCAAGGCTTGCCTGAGGTTGCACTTCGGC
GCATTATTTTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCCGTGAGA
AACATGAAGAATTTAAGTGGCTGATGCTTGGACCTTCTAACTGGAGTATG
GGAAAAAATTATTGTCATTCTGCTCCCTTTTTACAAGAT
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