EY660252

Overview
NameEY660252
Unique NameEY660252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_MYCGA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycoplasma gallisepticum GN=dxr PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.470e-11
Identity = 47/189 (24.87%), Postives = 93/189 (49.21%), Query Frame = 3 
Query:  252 ISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            I VLG+TGSIG Q +D++ +   K+ +V  +   N     + +K+  P  V   ++   ++      NV+           +IE         ++  I G  G++ ++ A+   KD+ LANKE+L+  G  +  +       I P DSEHSA++  ++   +  ++++++TASG  + +  +  ++ L+
Sbjct:    3 ILVLGATGSIGKQAIDVICQL--KYQLVGFSYYQNHNEANNILKQLNPNYVLCHSDPKYNK------NVKSD---------LIELIDKSKPKVIINAINGYHGIEASLIALSKKKDLLLANKESLVIAGSQLEAIRKDTKTTIYPIDSEHSALYDLLKDKKKNQIKQLMITASGAGYFNKDISELRKLT 174
The following BLAST results are available for this feature:
BLAST of EY660252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
DXR_MYCGA1.470e-1124.871-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660252 ID=EY660252; Name=EY660252; organism=Citrus sinensis; type=EST; length=889bp
TTCCAAGACCCACGTGTCCGGGCATTGATGTCAAAAACCCAGCTGAAATC
AAGGCTCTCTCTTTCTTGGAGACAACCAGGTCATATCACCCCCTCCCCAA
GCTCTCAGGTGGGTTTCCTTTGAAGAGGAAGGATAATGCAACGGCGACGT
TTGGTAGAATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGGCCA
GGCCGAGCTGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCC
AATCTCAGTGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACA
TAGTTGCGGAGCATGAAGATAAATTCATAGTTGTGGCACTGGCAGCTGGT
TCAAATATAACTCTTCTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGT
AGTTGCTGTTAGAAATGAGTCATTACTTGATGAAATCAAGGAGGCTTTGG
CTAATGTTGAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTCATT
GAGGCTGCCCGACACCCAGATGCTGTCACCGTGGTGACAGGTATAGTCGG
TTGTGCAGGATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATA
TAGCTTTGGCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTT
CCTCTAGCTCACAAGCATAACATAAAAATTCTTCCAGCTGATTCAGAACA
TTCTGCCATATTTCAGTGTATTCAAGGCTTGCCTGAGGTTGCACTTCGGC
GCATTATTTTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCCGTGAGA
AACATGAAGAATTTAAGTGGCTGATGCTTGGACCTTCTAACTGGAGTATG
GGAAAAAATTATTGTCATTCTGCTCCCTTTTTACAAGAT
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