EY660252

Overview
NameEY660252
Unique NameEY660252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_GEOSF (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sp. (strain FRC-32) GN=dxr PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 94/179 (52.51%), Postives = 123/179 (68.72%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAF 782
            K +++LGSTGSIG  TL+IVA H +KF ++AL AG NI LL +Q+  F PQ+VAV+NE L  +++  L+    K  ++ G +G+I AA   D   VV  IVG AGL PT AAIEAGKDIALANKETL+  G  ++ +     +K+ P DSEHSA+FQ +QG  +  +RRIILTASGG F
Sbjct:    2 KNLTILGSTGSIGVSTLEIVAAHPEKFKIIALTAGENIDLLKEQIDAFAPQLVAVKNEELALKLEGMLSC--RKTAVMYGVEGMIAAATASDTNMVVAAIVGAAGLLPTSAAIEAGKDIALANKETLVTAGRLIMDMVKTRGVKLYPVDSEHSAVFQSLQGHRKEDVRRIILTASGGPF 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_BACC7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain AH187) GN=dxr PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 91/181 (50.28%), Postives = 122/181 (67.40%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRD 788
            K IS+LG++GSIGTQTLD++  H D+F +VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRD 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_BACC3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain 03BB102) GN=dxr PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 91/181 (50.28%), Postives = 122/181 (67.40%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRD 788
            K IS+LG++GSIGTQTLD++  H D+F +VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRD 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_BACC1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus cereus (strain ATCC 10987) GN=dxr PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 91/181 (50.28%), Postives = 122/181 (67.40%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRD 788
            K IS+LG++GSIGTQTLD++  H D+F +VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRD 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR2_BACHK (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus thuringiensis subsp. konkukian GN=dxr2 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 91/181 (50.28%), Postives = 122/181 (67.40%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRD 788
            K IS+LG++GSIGTQTLD++  H D+F +VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGNEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRD 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR2_BACCZ (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus cereus (strain ZK / E33L) GN=dxr2 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 91/181 (50.28%), Postives = 122/181 (67.40%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRD 788
            K IS+LG++GSIGTQTLD++  H D+F +VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRD 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR2_BACAN (1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 OS=Bacillus anthracis GN=dxr2 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 91/181 (50.28%), Postives = 122/181 (67.40%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRD 788
            K IS+LG++GSIGTQTLD++  H D+F +VA + G NI      ++ F PQ+V+V+ E   D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FRD
Sbjct:    2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE--DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRD 178          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_EXIS2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxr PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.226e-43
Identity = 88/191 (46.07%), Postives = 128/191 (67.02%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            K +S++G TGSIGTQTLD++A + D+F +V+ A G NI +    + R +P++VAV +E++ ++++  L   +  P +L GE G+I  A    A  V+T +VG  GL+PT+AAIEAGK I LANKETL+  G  V+  A +  + ILP DSEH+AIFQC+ G     +R+IILTASGG+FRD     + N++
Sbjct:    2 KQVSIIGGTGSIGTQTLDVIAANPDRFQLVSFAFGKNIEVALPWLNRLRPELVAVLDETVKEQLEAVL---DYSPTVLVGEDGLIAVATADQADIVITAVVGAVGLRPTLAAIEAGKSIGLANKETLVTAGHLVMKKAREKGVAILPVDSEHAAIFQCLNGERRQDVRQIILTASGGSFRDQTREQLANVT 189          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR1_BACCZ (1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 OS=Bacillus cereus (strain ZK / E33L) GN=dxr1 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.226e-43
Identity = 89/190 (46.84%), Postives = 126/190 (66.32%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNL 815
            K IS+LGSTGSIGT  LD+V+ H + F +V L A  NI LL  Q+K F+P++V+V  + L D ++    ++    +I  G  G+I  A HPD+  V++ +VG +GL PT+ A++A KDIA+ANKETL+A G  V  LA ++  +++P DSEHSAIFQC+ G     + ++I+TASGGAFRD     MK L
Sbjct:    3 KYISILGSTGSIGTSALDVVSAHPEHFKIVGLTANYNIELLEQQIKMFQPRIVSVATKDLADTLR---MHISANTKITYGTDGLIAVATHPDSNLVLSSVVGVSGLLPTIEALKAKKDIAIANKETLVAAGHIVTELAKQNGCRLIPVDSEHSAIFQCLNGENNKEIDKLIVTASGGAFRDKTREEMKTL 189          
BLAST of EY660252 vs. ExPASy Swiss-Prot
Match: DXR_PELPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dxr PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.233e-42
Identity = 92/191 (48.17%), Postives = 124/191 (64.92%), Query Frame = 3
Query:  246 KPISVLGSTGSIGTQTLDIVAEHEDKFIVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEVALRRIILTASGGAFRDWPVRNMKNLS 818
            + +++LGSTGSIG  TLD+V +H +KF +  LA G ++ LLA+Q+K F P  V+VR+   + +++  L +   KPEI  G +G    A       VV+ IVG AGL PTV+AI+AGK IALANKETL+  G  V  L  KHN+ +LP DSEHSAIFQ + G     + RIILTASGG FR+     +KN++
Sbjct:    2 RSLAILGSTGSIGLSTLDVVRQHPEKFKIAGLAEGHDVALLAEQIKEFLPAAVSVRDADSVKKLQTLLGS--HKPEIFHGLEGAAAIASAEGVDMVVSAIVGAAGLLPTVSAIKAGKHIALANKETLVVAGKLVSDLVKKHNVHLLPVDSEHSAIFQSLAGHRAEDVERIILTASGGPFRNTSAEELKNVT 190          
The following BLAST results are available for this feature:
BLAST of EY660252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
DXR_GEOSF1.456e-4352.511-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC71.456e-4350.281-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC31.456e-4350.281-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR_BACC11.456e-4350.281-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR2_BACHK1.456e-4350.281-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR2_BACCZ1.456e-4350.281-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR2_BACAN1.456e-4350.281-deoxy-D-xylulose 5-phosphate reductoisomerase 2 ... [more]
DXR_EXIS27.226e-4346.071-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]
DXR1_BACCZ7.226e-4346.841-deoxy-D-xylulose 5-phosphate reductoisomerase 1 ... [more]
DXR_PELPB1.233e-4248.171-deoxy-D-xylulose 5-phosphate reductoisomerase OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660252 ID=EY660252; Name=EY660252; organism=Citrus sinensis; type=EST; length=889bp
TTCCAAGACCCACGTGTCCGGGCATTGATGTCAAAAACCCAGCTGAAATC
AAGGCTCTCTCTTTCTTGGAGACAACCAGGTCATATCACCCCCTCCCCAA
GCTCTCAGGTGGGTTTCCTTTGAAGAGGAAGGATAATGCAACGGCGACGT
TTGGTAGAATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGGCCA
GGCCGAGCTGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCC
AATCTCAGTGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACA
TAGTTGCGGAGCATGAAGATAAATTCATAGTTGTGGCACTGGCAGCTGGT
TCAAATATAACTCTTCTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGT
AGTTGCTGTTAGAAATGAGTCATTACTTGATGAAATCAAGGAGGCTTTGG
CTAATGTTGAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTCATT
GAGGCTGCCCGACACCCAGATGCTGTCACCGTGGTGACAGGTATAGTCGG
TTGTGCAGGATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATA
TAGCTTTGGCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTT
CCTCTAGCTCACAAGCATAACATAAAAATTCTTCCAGCTGATTCAGAACA
TTCTGCCATATTTCAGTGTATTCAAGGCTTGCCTGAGGTTGCACTTCGGC
GCATTATTTTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCCGTGAGA
AACATGAAGAATTTAAGTGGCTGATGCTTGGACCTTCTAACTGGAGTATG
GGAAAAAATTATTGTCATTCTGCTCCCTTTTTACAAGAT
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