EY660251

Overview
NameEY660251
Unique NameEY660251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.545e-25
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 1
Query:  247 AHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENV---RDELDFEFLGNRTGQPYPVQTNIYANG--KGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPI 630
            AH  Q+ G  A +L L ++SG G  SK +Y +G  S  +KL  G ++G V AFY+ SN E      DE+D E LG      + +QTN+YANG  +  RE++   WFDP   +H YT++WN HH VF VD++P+
Sbjct:   53 AHNIQVNGSLA-KLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPV 183          

HSP 2 Score: 29.6462 bits (65), Expect = 1.545e-25
Identity = 11/32 (34.38%), Postives = 18/32 (56.25%), Query Frame = 3
Query:  669 NQPMGGYSTLWEAHDWGTKRWS*NNNWRQTPF 764
            ++PM  Y T+W+  +W TK      N++  PF
Sbjct:  198 SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPF 229          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24
Identity = 61/142 (42.96%), Postives = 83/142 (58.45%), Query Frame = 1
Query:  211 TFLEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGDREQRANLWFDPAADYHLYTILWNHHHIVFYVDDVPIMV 636
            T+  ++  TW    L  I     +QL L +NSG GF S+  Y  G  ++ IK     S G +T+FY+ S +    DEL F+ LG + G PY + TN+Y  G+G ++QR  LWFDP  DYH Y+ LWN + +VFYVDD PI V
Sbjct:   23 TWGNNYYQTWGHQAL-VINKTSELQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSR-HDELCFQILG-KNGPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRV 161          
BLAST of EY660251 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 1
Query:  217 LEDFKVTWSDAHLRQIEGGRAIQLVLHQNSGCGFASKRQYLFGRVSMFIKLLPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYPVQTNIYANGKGD--REQRANLWFDPAADYHLYTILWNHHHIVFYVD 618
            LEDF  T S     +   G  +  +  + +G    S R +L+G+ S  +++    S G VTAF +   T  + DE+DFE+LG   G     Q+N Y+ G  D  R QR  +  D  A YH Y I W+   I++YVD
Sbjct:  148 LEDFDFTHSGYTSIEASSGNIVLAMPKKTTGSLITSTRSFLYGKAS--VRMKTARSRGVVTAFDL---TSAIGDEIDFEWLG---GDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVD 275          
The following BLAST results are available for this feature:
BLAST of EY660251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH33_ARATH1.545e-2542.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH11_ARATH7.555e-2442.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
CRR1_YEAST9.579e-1134.56Probable glycosidase CRR1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660251 ID=EY660251; Name=EY660251; organism=Citrus sinensis; type=EST; length=890bp
TCTGGTACCCTGCGGTACTCTTCCGGAATTCTTCGTAGGCGACGTGTCCG
TAACCACCTGCCTAAAAAAAGTTTTCTTTCTAATTAGTAACAGATAATAT
TTTATTGTACGTCTCGTTCTACAAATATGGCTATCCTAAGAAATGCAATA
GCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAGG
GCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCCC
ATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTACACCAA
AATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTGT
AAGCATGTTTATCAAGCTCCTTCCTGGAGACTCTGCTGGAACTGTCACTG
CATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGATTTT
GAGTTCCTGGGAAACCGAACGGGTCAGCCTTACCCGGTCCAGACCAATAT
CTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGCGAACCTCTGGTTTG
ACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCACCAT
ATTGTCTTCTATGTGGATGATGTGCCCATCATGGTTTCCAAAACAGTGGA
AGGGCTCCATTTCCAATGAACCAACCCATGGGGGGGTATTCCACGCTGTG
GGAAGCACATGACTGGGGAACAAAAAGGTGGTCTTGAAACAATAATTGGA
GACAAACCCCTTTTTTTGCTTATTACAAACACTTGGTATTTGAGGGTGGC
CAGNTCCTGGACCTGCAAATCGGGTCTCTCATCCCGTTTCTGGTGGAGGG
CTATTATTCCATGCCTCTCCGCCTGTGGAACAGAAAATCA
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