EY660249

Overview
NameEY660249
Unique NameEY660249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: DYR1B_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Homo sapiens GN=DYRK1B PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16
Identity = 67/204 (32.84%), Postives = 96/204 (47.06%), Query Frame = 1
Query:   76 IGVCHRDIKPQNSP-ANTHTYQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTPTREEIKCMNPNYTEFKFPQIKAHPW--------HKIFQ---KRMPPEAV--------------------------DLVSRLLQYSPNLRSTALEALIHPFF 573
            + + H D+KP+N    N     +K+ DFGS+  L  G+    YI SR+YR+PE++ G T Y  AID+WS GC+L E+  G+PLF G + VDQ+  I +VLG P    +    P   ++ F ++    W         K +Q    R   E +                          DLV R+L+Y P  R + L AL H FF
Sbjct:  233 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLLG-TPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNRIVEVLGIPPAAMLD-QAPKARKY-FERLPGGGWTLRRTKELRKDYQGPGTRRLQEVLGVQTGGPGGRRAGEPGHSPADYLRFQDLVLRMLEYEPAARISPLGALQHGFF 431          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: DYR1A_XENLA (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Xenopus laevis GN=dyrk1a PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1
Query:   76 IGVCHRDIKPQNSP-ANTHTYQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTP 381
            + + H D+KP+N    N     +K+ DFGS+  L  G+    YI SR+YR+PE++ G T Y  AID+WS GC+L E+  G+PLF G + VDQ+ +I +VLG P
Sbjct:  273 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQYIQSRFYRSPEVLLG-TPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMSKIVEVLGIP 372          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16
Identity = 58/173 (33.53%), Postives = 83/173 (47.98%), Query Frame = 1
Query:   88 HRDIKPQNSPANTHTYQLKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRM-------PPEAVDLVSRLLQYSPNLRSTALEALIHPFFDD 579
            HRDIK  N   N    Q+KL DFG A++    E  P  + + + +YR PEL+ G   YT AID+WS GC+L EL   +P+F     + QL  I ++ G+P      C        K P        K +++++       P  A+DL   +L   P+ R TA +AL   F  D
Sbjct:  835 HRDIKCSNILLNNRG-QIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSP------CPAVWPDVIKLPYFNTMKPKKQYRRKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEFLRD 1000          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16
Identity = 58/173 (33.53%), Postives = 83/173 (47.98%), Query Frame = 1
Query:   88 HRDIKPQNSPANTHTYQLKLCDFGSAKVLVKGE--PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRM-------PPEAVDLVSRLLQYSPNLRSTALEALIHPFFDD 579
            HRDIK  N   N    Q+KL DFG A++    E  P  + + + +YR PEL+ G   YT AID+WS GC+L EL   +P+F     + QL  I ++ G+P      C        K P        K +++++       P  A+DL   +L   P+ R TA +AL   F  D
Sbjct:  835 HRDIKCSNILLNNRG-QIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSP------CPAVWPDVIKLPYFNTMKPKKQYRRKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEFLRD 1000          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: MK04_RAT (Mitogen-activated protein kinase 4 (Fragment) OS=Rattus norvegicus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.229e-16
Identity = 50/156 (32.05%), Postives = 89/156 (57.05%), Query Frame = 1
Query:   82 VCHRDIKPQNSPANTHTYQLKLCDFGSAKVLVKGEPNISYIC----SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQ---LVEIFKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSP 528
            V HRD+KP N   +T    LK+ DFG A++  +   +  Y+     +++YR+P L+     YT AID+W+AGC+LAE+L G+ LF G   ++Q   +++   V+    +EE+  + P++    + ++K  P  K+    +  EA+D + ++L +SP
Sbjct:  119 VLHRDLKPANIFISTEDLVLKIGDFGLARIADQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEELLRVMPSFVSSTW-EVK-RPLRKLLPD-VNREAIDFLEKILTFSP 271          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.217e-16
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 1
Query:   82 VCHRDIKPQNSPANTHTYQ-LKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTPTR 387
            + H D+KP+N          +K+ DFGS+    + +   +YI SR+YRAPE+I G  +Y  AID+WS GC+LAELL G  LFPGE+  DQL  I +VLG P +
Sbjct:  398 IIHCDMKPENVLLKQQGRSGIKVIDFGSS--CFENQRIYTYIQSRFYRAPEVILGG-KYGRAIDMWSLGCILAELLSGHALFPGENESDQLACIIEVLGMPNK 497          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: Y823_ENCCU (Probable cell division protein kinase ECU08_0230 OS=Encephalitozoon cuniculi GN=ECU08_0230 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 1
Query:   43 IVLGRFAIHNIIGVCHRDIKPQNSPANTHTYQLKLCDFGSAKVL-VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGT 378
            ++ G   +H +  V HRD+KPQN    T    LK+ DFG ++ L ++  P  S + + +YR+PEL+ G+T Y   +DIWS GC++ E++  +PLFPGES  +QL  I +  GT
Sbjct:  105 LICGVHYLHRM-NVVHRDLKPQNILV-TSDGVLKIADFGLSRSLEIRVPPYSSEVVTLWYRSPELLMGSTSYRFYVDIWSLGCIIYEMITLEPLFPGESKENQLTLIRRKAGT 215          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16
Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 1
Query:   82 VCHRDIKPQNSP-ANTHTYQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTPTREEI-KCMNPN--YTEFKFPQ-------IKAHPWHKIFQKRMPPEAV---DLVSRLLQYSPNLRSTALEALIHPF 570
            V H D+KP+N    +    Q+K+ DFGS+    +GE   +YI SR+YR+PE+I G   Y   ID+WS GC++AE+  G PLFPGE+  +QL  I ++ G P    I KC      +     P+       +   P+ K   + +  + V     +S  L++ P+ R T  +A  H F
Sbjct:  821 VIHCDLKPENILLCHPFKSQVKVIDFGSS--CFEGECVYTYIQSRFYRSPEVILGMG-YGTPIDVWSLGCIIAEMYTGFPLFPGENEQEQLACIMEIFGPPDHSLIDKCSRKKVFFDSSGKPRPFVSSKGVSRRPFSKSLHQVLQCKDVSFLSFISDCLKWDPDERMTPQQAAQHDF 994          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: CDKF1_ARATH (Cyclin-dependent kinase F-1 OS=Arabidopsis thaliana GN=CDKF-1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16
Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 1
Query:  196 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTPTREEI--KCMN-PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDDYVILIPDSQM 609
            S + +R++R PEL++G+T Y   +D+WS GCV AELL  +PLFPG S +DQ+  +  VLG    EE+   C++ P+Y    F ++++    +        + + L+ +L+ Y P  R+T +E L   +  +  + +P S++
Sbjct:  291 SCVGTRWFRPPELLYGSTMYGLEVDLWSLGCVFAELLSLEPLFPGISDIDQISRVTNVLGN-LNEEVWPGCVDLPDYKSISFAKVESPLGIEGCLPNHSGDVISLLKKLICYDPASRATTMEMLNDKYLSEEPLPVPVSEL 430          
BLAST of EY660249 vs. ExPASy Swiss-Prot
Match: CDK4_HUMAN (Cell division protein kinase 4 OS=Homo sapiens GN=CDK4 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 1
Query:   82 VCHRDIKPQNSPANTHTYQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIFKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPF 570
            + HRD+KP+N    T    +KL DFG A++          + + +YRAPE++  +T Y   +D+WS GC+ AE+   +PLF G S  DQL +IF ++G P  ++    + +     FP     P   +  + M      L+  +L ++P+ R +A  AL H +
Sbjct:  136 IVHRDLKPENILV-TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSY 294          
The following BLAST results are available for this feature:
BLAST of EY660249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DYR1B_HUMAN2.472e-1632.84Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_XENLA2.472e-1644.66Dual specificity tyrosine-phosphorylation-regulate... [more]
CDK13_MOUSE2.472e-1633.53Cell division protein kinase 13 OS=Mus musculus GN... [more]
CDK13_HUMAN2.472e-1633.53Cell division protein kinase 13 OS=Homo sapiens GN... [more]
MK04_RAT3.229e-1632.05Mitogen-activated protein kinase 4 (Fragment) OS=R... [more]
DYRK3_DROME4.217e-1646.60Putative dual specificity tyrosine-phosphorylation... [more]
Y823_ENCCU5.508e-1640.71Probable cell division protein kinase ECU08_0230 O... [more]
POM1_SCHPO5.508e-1633.90Dual specificity protein kinase pom1 OS=Schizosacc... [more]
CDKF1_ARATH5.508e-1632.62Cyclin-dependent kinase F-1 OS=Arabidopsis thalian... [more]
CDK4_HUMAN5.508e-1631.29Cell division protein kinase 4 OS=Homo sapiens GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-020-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660249 ID=EY660249; Name=EY660249; organism=Citrus sinensis; type=EST; length=861bp
TCTGGTCTCCTGCGGTACTCTTCCGGAATCCTCGGTAGGGGGATTGTCCT
CGGACGTTTTGCAATACATAACATTATTGGAGTTTGCCACAGGGACATAA
AGCCTCAAAATTCTCCGGCCAATACACATACCTACCAGCTGAAATTGTGT
GACTTTGGAAGTGCAAAAGTTCTGGTAAAGGGGGAACCAAATATCTCTTA
CATATGTTCAAGATACTATCGAGCACCTGAACTTATATTTGGTGCAACTG
AGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAA
CTGCTACTGGGACAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCT
TGTGGAAATCTTCAAGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGT
GCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAAATCAAAGCTCAC
CCGTGGCACAAGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCT
TGTCTCTAGACTACTGCAGTACTCTCCCAATCTTCGGAGCACAGCATTGG
AAGCTTTGATTCATCCCTTCTTTGATGACTACGTGATCCTAATACCCGAC
TCCCAAATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATGGA
CTGAAAGGTGTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGC
AAGAAAACAGTGTGCCTTCCTTGGTTTGTGATTGGGNTCTCCAAAAGTGA
AGACCTGCTCTTGCAGGTTGCAGCTTTGCATAAATATTGATCTGCCTGAA
AAATGTAGCTAGTGCCCTGTTCCAGTGAAAATTGGAAAAGTTGGGTAATT
GGTTCCCACCC
back to top