EY660193

Overview
NameEY660193
Unique NameEY660193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30
Identity = 88/264 (33.33%), Postives = 137/264 (51.89%), Query Frame = 1
Query:  100 SEADEDQIPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFP--TKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            S A ++Q P     PDD   + ++SGTTG PKG +LTH++L ++ A  V G    L +   D V+C LP+FH++ L   +   L +GA VL+  +F   ++ +L+++ + +             ++      D SS+R+ +SG A +   L  A   +    IL +GYG++EA PV          PF    K GS GT + + E KV+DP  G  LP +Q GE+ ++GP +M  Y   P  T   +   GWL+TGD+   D+D
Sbjct:  157 SAAKQNQEPV----PDDTAVILYTSGTTGKPKGAMLTHQNLYSN-ANDVAG---YLGMDERDNVVCALPMFHVFCLTVCMNAPLMSGATVLIEPQFSPASVFKLVKQQQATIFAGVPTMYNYLFQHENGKKDDFSSIRLCISGGASMPVALLTAFEEKFGVTIL-EGYGLSEASPVTCF------NPFDRGRKPGSIGTSILHVENKVVDP-LGRELPAHQVGELIVKGPNVMKGYYKMPMETEHALK-DGWLYTGDLARRDED 403          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.280e-27
Identity = 86/265 (32.45%), Postives = 128/265 (48.30%), Query Frame = 1
Query:  130 VAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVD------------GENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKS-GSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            VA+K  D  A+ +SSGTTG  K V +TH++LI  ++   D            GE P        V L  +PLFH++    VL  S+  G   +LM++F+  A L  I+R+RV+             K       DLSS+ V+  G APLG+E+ +   S  P   L QGYG+TE+   ++  +G    P  +K+ GS G +  + + K++DP TG                     Y+ D   TAAT+D  GWL TGD+ + ++D
Sbjct:  191 VAVKQSDTAAVLYSSGTTGRVKAVAITHRNLIALMSLHADNREKVAREAAEAGEEP----PPPAVTLLPIPLFHVFGFMMVLR-SVSMGETSVLMERFDFIAALRAIERYRVTLLPAAPPVLVAMVKYEEARRRDLSSLLVIGIGGAPLGREVAEQFASVFPNVELVQGYGLTESSGAVAATVG----PEESKAYGSVGKLGSHLQAKIVDPSTG---------------------YVGDDEATAATVDSEGWLKTGDLCYFNED 425          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: YNGI_BACSU (Putative acyl-CoA synthetase yngI OS=Bacillus subtilis GN=yngI PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.300e-27
Identity = 69/251 (27.49%), Postives = 125/251 (49.80%), Query Frame = 1
Query:  133 AIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            ++  D+ + + ++SGTTG PKGV+LTH ++I + A   +     + LT+ D +   +P FH +     +L  +  GA ++ +Q+F+   +L+ +++ + +              +P    YDLS++R  +   +P   E+  A+  R+    +   YG TEA PV++     A   F  +  + G  + + E+K+++P T   +     GE+C RG  +M  Y  D   T   I+  GWL TGD+   D+D
Sbjct:  186 SLDKDNVINMQYTSGTTGFPKGVMLTHFNVINNAANIAEC----MALTSQDRMCIPVPFFHCFGCVLGVLACVSVGAAMIPVQEFDPVTVLKTVEKEKCTVLHGVPTMFIAELHHPDFDAYDLSTLRTGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVITQTR--ANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTGDLAVMDED 430          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26
Identity = 73/254 (28.74%), Postives = 124/254 (48.82%), Query Frame = 1
Query:  136 IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDG--ENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXK--NPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            +  DD   L +SSGTTG  KGV  +H +LI  VA+ +    E P          +C +PLFH + L + +L +L  G  V+++ +F++G ++  ++++R +                + ++  YD+S +R V  G APL KE+      + P   + QGY +TE+    +      +     + G+ G +    E +++DP TG  +  NQ GE+ ++GP I   Y  +       I   GWL TGD+ + D+D
Sbjct:  196 VHKDDTAMLLYSSGTTGRSKGVNSSHGNLIAHVARYIAEPFEQPQ------QTFICTVPLFHTFGLLNFVLATLALGTTVVILPRFDLGEMMAAVEKYRATTLILVPPVLVTMINKADQIMKKYDVSFLRTVRCGGAPLSKEVTQGFMKKYPTVDVYQGYALTESNGAGASIESVEES---RRYGAVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRN---EEEIITSEGWLKTGDLCYIDND 437          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 92/276 (33.33%), Postives = 130/276 (47.10%), Query Frame = 1
Query:   88 FTVLSEADEDQIPE--VAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGD-VVLCVLPLFHIYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXK-NPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXR------YLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            F  L E D +   E  V +  DD  A+ +SSGT+G  KGVV+TH++LI  V   V  E         D V L  LP+FH+Y L+   +  L  G  V++M++F +   ++ I++++V+             + NP +   +L S+  V SGAAPL   L        P     QGYGMTE+  V +      K     K  S G +  N   K++  E+G+ LP    GE+ + GP IM        YLND        D  GWL TGDI + D D
Sbjct:  178 FHALLETDPETPVEMGVGVGQDDAAAVLYSSGTSGRSKGVVVTHRNLIAMVELFVRFEASQYTRPARDNVYLAALPMFHVYGLSLFAVGLLSLGCTVVVMRRFNVDDAVKAIRKYKVTHLPLVPPIMSALLRANPPL---ELDSLLQVSSGAAPLNHTLIHHFLHAFPHVDFIQGYGMTESTAVGTRGFNTCKH---KKYASVGLLAPNMHAKIVHLESGSCLPPGSYGELWLHGPAIMKEFCFVTGYLNDDDDAFTRKD--GWLRTGDIAYFDSD 445          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 76/252 (30.16%), Postives = 129/252 (51.19%), Query Frame = 1
Query:  142 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTK--SGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            P+D   L ++ GTTG+ KG +LTH++++ ++ +QV+     L     ++V+  LPL+HI++L  N +L   L  G  +L+    +I  L++ + ++  +              N      D SS+ +   G  P+ + + +       Q +L +GYG+TE  P++S+       P+     SGS G  V + E K++D +    +P  QPGE+C++GPQ+M  Y   P  T   I   GWLHTGDI   D++
Sbjct:  205 PEDLAFLQYTGGTTGVAKGAMLTHRNMLANL-EQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLL-EGYGLTECAPLVSV------NPYDIDYHSGSIGLPVPSTEAKLVDDDDN-EVPPGQPGELCVKGPQVMLGYWQRPDATDEIIK-NGWLHTGDIAVMDEE 445          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.054e-25
Identity = 76/252 (30.16%), Postives = 129/252 (51.19%), Query Frame = 1
Query:  142 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTK--SGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            P+D   L ++ GTTG+ KG +LTH++++ ++ +QV+     L     ++V+  LPL+HI++L  N +L   L  G  +L+    +I  L++ + ++  +              N      D SS+ +   G  P+ + + +       Q +L +GYG+TE  P++S+       P+     SGS G  V + E K++D +    +P  QPGE+C++GPQ+M  Y   P  T   I   GWLHTGDI   D++
Sbjct:  205 PEDLAFLQYTGGTTGVAKGAMLTHRNMLANL-EQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLL-EGYGLTECAPLVSV------NPYDIDYHSGSIGLPVPSTEAKLVDDDDN-EVPPGQPGELCVKGPQVMLGYWQRPDATDEIIK-NGWLHTGDIAVMDEE 445          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.377e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 1
Query:  142 PDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLPLFHIYSL--NSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTK--SGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDIGFCDDD 885
            P+D   L ++ GTTG+ KG +LTH++++ ++ +QV+     L     ++V+  LPL+HI++L  N +L   L  G  +L+    +I  L++ + ++  +              N      D SS+ +   G  P+ + + +       Q +L +GYG+TE  P++S+       P+     SGS G  V + E K++D +     P  QPGE+C+RGPQ+M  Y   P  T   I   GWLHTGDI   D++
Sbjct:  205 PEDLAFLQYTGGTTGVAKGAMLTHRNMLANL-EQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIEL-GGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLL-EGYGLTECAPLVSV------NPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVSP-GQPGELCVRGPQVMLGYWQRPDATDEIIK-NGWLHTGDIAVMDEE 445          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: ACSF2_MACFA (Acyl-CoA synthetase family member 2, mitochondrial OS=Macaca fascicularis GN=ACSF2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.067e-25
Identity = 86/293 (29.35%), Postives = 133/293 (45.39%), Query Frame = 1
Query:   46 TVITIDAP-PENCLHFTVLSEADEDQIPEVA------IKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLTNGDVVLCVLP--LFH-IYSLNSVLLCSLRAGAGVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSSVRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTAATIDGGGWLHTGDI------GFC 876
            TVI++DAP P   L   VL+     Q  E        +   DP+ + F+SGTTG PKG  L+H +++ +    + GE   L+    + +  +LP  L+H + S+   ++C +     +L    F     LE I R R S               P  + YD+S++R  +   +P   EL  A+ +++    L   YG TE  PV      F +     K+ S G ++ + E ++++ E G     N PGE+CIRG  +M  Y  +P  T   +D   W  TGDI      GFC
Sbjct:  218 TVISVDAPLPGTLLLDEVLAAGSTQQHLEQLQHIQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNN--SSILGERLKLHEKTPEQLRMILPSPLYHCLGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILNQPDFSSYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFA--NFPEDTVEQKAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVMLGYWGEPQKTGEAVDQDKWYRTGDIATMNEQGFC 506          
BLAST of EY660193 vs. ExPASy Swiss-Prot
Match: 4CLL8_ORYSJ (Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica GN=4CLL8 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25
Identity = 94/331 (28.40%), Postives = 142/331 (42.90%), Query Frame = 1
Query:   94 VLSEADEDQ---IPEVAIKPDDPVALPFSSGTTGLPKGVVLTHKSLITSVAQQV--------DGENPNLYLTNGDVVLCVLPLFHIYSLNSVLLCSLRAGA-GVLLMQKFEIGALLELIQRHRVSXXXXXXXXXXXXXKNPMVADYDLSS------------VRVVLSGAAPLGKELEDALRSRVPQAILGQGYGMTEAGPVLSMC------LGFAKQPFPTKSG----------------------------SCGTVVRNAELKVIDPETGASLPHNQPGEICIRGPQIMXRYLNDPXGTA---------ATIDGGG--WLHTGDIGFCD 879
            V +E D+D+   +P   I  DD   L +SSGTTG  KGVV TH + I   A            GE P  Y  + +   CVLP+FH++  +S ++ +   GA  V++  +F +   +  ++ + V+               PMV     ++            +R V+S  APL +E     RS  P   LGQ YG+TE   +++MC       G  K   P  S                             S G ++ + E K++DP++G  LP  + GE+ +RGP  M  YLN+   TA          ++ GGG  WL TGD+ + D
Sbjct:  166 VAAEVDDDETLDLPAANIGRDDAALLFYSSGTTGRSKGVVSTHGNAIAMAASLERAWGGGGGGGEKPQQYDDHDEAYGCVLPMFHMFGFSSFVMGTAALGATAVVVPGRFSVEKTMAAVEEYGVTRLLVVP---------PMVVKMVAAAAGDGEPSRRRLRLRQVVSSGAPLQREHMARFRSCFPAVNLGQCYGLTETTGIVTMCDLQHNDNGIDKVEMPPSSTDMTFVAVAATTTEVKERSTGGGGGGGGVSIGRLMPDVEAKIVDPDSGELLPPRRTGELWVRGPSTMRGYLNNEEATALALVAAAGSVSVSGGGERWLRTGDLCYVD 487          
The following BLAST results are available for this feature:
BLAST of EY660193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
LCFB_BACSU9.214e-3033.33Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]
4CLL5_ORYSJ4.280e-2732.454-coumarate--CoA ligase-like 5 OS=Oryza sativa sub... [more]
YNGI_BACSU7.300e-2727.49Putative acyl-CoA synthetase yngI OS=Bacillus subt... [more]
4CLL8_ARATH1.626e-2628.744-coumarate--CoA ligase-like 8 OS=Arabidopsis thal... [more]
4CLL2_ORYSJ2.124e-2633.334-coumarate--CoA ligase-like 2 OS=Oryza sativa sub... [more]
LCFA_ECOLI1.054e-2530.16Long-chain-fatty-acid--CoA ligase OS=Escherichia c... [more]
LCFA_ECOL61.054e-2530.16Long-chain-fatty-acid--CoA ligase OS=Escherichia c... [more]
LCFA_ECO571.377e-2530.56Long-chain-fatty-acid--CoA ligase OS=Escherichia c... [more]
ACSF2_MACFA3.067e-2529.35Acyl-CoA synthetase family member 2, mitochondrial... [more]
4CLL8_ORYSJ5.232e-2528.40Putative 4-coumarate--CoA ligase-like 8 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660193 ID=EY660193; Name=EY660193; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGCGTCGACAGGTTGCCGAAGACGGACAAAGATTTCACAGT
GATCACGATCGATGCCCCTCCGGAGAATTGCCTGCATTTCACAGTGTTAT
CGGAAGCAGATGAGGATCAAATCCCAGAAGTTGCCATCAAGCCCGACGAT
CCTGTGGCGTTGCCCTTCTCTTCGGGCACCACGGGATTGCCTAAAGGAGT
GGTGCTGACGCACAAGAGCTTGATCACCAGCGTGGCGCAGCAAGTGGATG
GAGAGAACCCGAATCTTTACTTGACAAACGGAGACGTTGTGCTGTGCGTT
TTACCTTTGTTTCACATTTATTCGTTGAACAGCGTGCTTCTGTGCTCGTT
GAGAGCTGGGGCTGGGGTTCTGTTGATGCAGAAGTTTGAGATAGGGGCGC
TGCTGGAGCTGATACAGCGGCACAGGGTGTCGGTGGCGGCTGTGGTGCCG
CCCTTGGTGCTGGCGCTGGCCAAGAACCCGATGGTGGCGGATTATGACCT
GAGCTCGGTCAGGGTGGTGCTTTCCGGGGCGGCGCCGCTGGGGAAGGAGC
TTGAAGATGCTCTCCGAAGTAGAGTCCCTCAAGCAATCTTGGGTCAGGGA
TATGGAATGACAGAGGCAGGGCCAGTGCTATCAATGTGCCTAGGATTTGC
AAAGCAGCCATTTCCTACAAAGTCAGGATCATGTGGCACCGTTGTTAGAA
ATGCTGAGCTCAAAGTTATTGACCCTGAAACTGGTGCCTCCCTTCCCCAC
AATCAACCTGGCGAAATTTGCATCCGCGGCCCTCAAATTATGNAAAGGTA
CTTGAATGATCCTGANGGCACTGCNGCAACTATAGACGGTGGAGGTTGGC
TTCATACTGGTGACATAGGCTTTTGTGATGATGATGATGA
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