EY660190

Overview
NameEY660190
Unique NameEY660190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2)

HSP 1 Score: 391.349 bits (1004), Expect = 3.950e-108
Identity = 200/242 (82.64%), Postives = 219/242 (90.50%), Query Frame = 1
Query:  148 MAGLAPEGSQFDARQYDTKMNELLST-DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DY-KEVMEQPGKI 867
            MAG+APEGSQFDA+ YD+KM ELL+  + ++FFTSYDEV++SFD MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +V+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +  HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL + + VG FSAT  PE  +  ++ M +P +I
Sbjct:    1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRI 242          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 1.149e-107
Identity = 201/241 (83.40%), Postives = 217/241 (90.04%), Query Frame = 1
Query:  148 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DY-KEVMEQPGKI 867
            MAGLAPEGSQFD +QYD KM E+L+   +DFFTSYD+V +SFD+MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +  HVVVGTPGRVFDMLRRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLL + + VG FSAT  PE  +  ++ M +P +I
Sbjct:    1 MAGLAPEGSQFDDKQYDKKMQEILT---EDFFTSYDDVCESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRI 238          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A_WHEAT (Eukaryotic initiation factor 4A OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.501e-107
Identity = 200/242 (82.64%), Postives = 218/242 (90.08%), Query Frame = 1
Query:  148 MAGLAPEGSQFDARQYDTKMNELLST-DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DY-KEVMEQPGKI 867
            MAG+APEGSQFDA+ YD+KM ELLS  + ++FFTSYDEV++SFD MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +  HVVVGTPGRVFD++RRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLL   + VG FSAT  PE  +  ++ M +P +I
Sbjct:    1 MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDIVRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRI 242          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.961e-107
Identity = 202/242 (83.47%), Postives = 217/242 (89.67%), Query Frame = 1
Query:  148 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DY-KEVMEQPGKI 867
            MAG APEG+QFD RQ+D ++NE+L  DGQD FFTSYDEV++SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQA  HVVVGTPGRVFDMLRRQSLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLL   + VG FSAT  PE  +  ++ M +P +I
Sbjct:    1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 240          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 1.271e-106
Identity = 200/242 (82.64%), Postives = 218/242 (90.08%), Query Frame = 1
Query:  148 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DY-KEVMEQPGKI 867
            MAG APEG+QFDARQ+D K+NE+L  +GQD FFTSYD+V++SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA  HVVVGTPGRVFDML+RQSLR D IKMFVLDEADEMLSRGFKDQIYDIFQLL   + VG FSAT  PE  +  ++ M +P +I
Sbjct:    1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI 240          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 2.100e-101
Identity = 189/242 (78.10%), Postives = 212/242 (87.60%), Query Frame = 1
Query:  148 MAGLAPEGSQFDARQYDTKMNELLSTDGQD-FFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DY-KEVMEQPGKI 867
            MAG+A +G+Q+D RQ+DTKMN +L  +G++ F+T+YDEV DSFDAM LQ +LLRGIYAYGFEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD  LVQCQALVLAPTRELAQQIEKVMRALGDYLGVK  ACVGGTSVREDQR+LQ+  HVVVGTPGRVFD+LRRQSLR D IKMFVLDEADEMLSRGFKDQIYDIFQLL + V VG FSAT  PE  +  ++ M +P +I
Sbjct:    1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRI 242          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3)

HSP 1 Score: 260.381 bits (664), Expect = 1.052e-68
Identity = 129/194 (66.49%), Postives = 157/194 (80.93%), Query Frame = 1
Query:  244 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPE 825
            +++ EVYD+FD M L+E LLRGIY YGFEKPSAIQQR I+P  +G DVI QAQSGTGKTATF   ILQQ+D  + +CQAL+LAPTRELA QI++V+ ALG+Y+ V  HAC+GGT+VRED RIL++ CHVVVGTPGRV+DM+ R+ LR  YIK+FVLDEADEMLSRGFKDQI D+F++L   V V   SAT  P+
Sbjct:   23 STWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPD 216          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.996e-68
Identity = 137/205 (66.83%), Postives = 162/205 (79.02%), Query Frame = 1
Query:  244 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAEC-HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DYKEVMEQ 855
            ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P  KG DVI QAQSGTGKTATF   ILQQL+  L + QALVLAPTRELAQQI+KV+ ALGDY+G   HAC+GGT+VR + + LQAE  H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ LS  + V   SAT    P D  EV ++
Sbjct:   26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATM---PMDVLEVTKK 227          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.383e-67
Identity = 135/205 (65.85%), Postives = 161/205 (78.54%), Query Frame = 1
Query:  244 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAEC-HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DYKEVMEQ 855
            ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P  KG DVI QAQSGTGKTATF   ILQQL+    + QALVLAPTRELAQQI+KV+ ALGDY+G   HAC+GGT+VR + + LQAE  H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L+  + V   SAT    P D  EV ++
Sbjct:   26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM---PTDVLEVTKK 227          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.383e-67
Identity = 135/205 (65.85%), Postives = 161/205 (78.54%), Query Frame = 1
Query:  244 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAEC-HVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPEP*DYKEVMEQ 855
            ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P  KG DVI QAQSGTGKTATF   ILQQL+    + QALVLAPTRELAQQI+KV+ ALGDY+G   HAC+GGT+VR + + LQAE  H+VVGTPGRVFDML R+ L P +IKMFVLDEADEMLSRGFKDQIY+IFQ L+  + V   SAT    P D  EV ++
Sbjct:   26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATM---PTDVLEVTKK 227          
The following BLAST results are available for this feature:
BLAST of EY660190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A1_ORYSJ3.950e-10882.64Eukaryotic initiation factor 4A-1 OS=Oryza sativa ... [more]
IF4A_MAIZE1.149e-10783.40Eukaryotic initiation factor 4A OS=Zea mays PE=2 S... [more]
IF4A_WHEAT1.501e-10782.64Eukaryotic initiation factor 4A OS=Triticum aestiv... [more]
IF4A2_ARATH1.961e-10783.47Eukaryotic initiation factor 4A-2 OS=Arabidopsis t... [more]
IF4A1_ARATH1.271e-10682.64Eukaryotic initiation factor 4A-1 OS=Arabidopsis t... [more]
IF4A3_ARATH2.100e-10178.10Eukaryotic initiation factor 4A-3 OS=Arabidopsis t... [more]
IF4A_DROME1.052e-6866.49Eukaryotic initiation factor 4A OS=Drosophila mela... [more]
IF4A2_CHICK3.996e-6866.83Eukaryotic initiation factor 4A-II OS=Gallus gallu... [more]
IF4A2_RAT3.383e-6765.85Eukaryotic initiation factor 4A-II OS=Rattus norve... [more]
IF4A2_PONAB3.383e-6765.85Eukaryotic initiation factor 4A-II OS=Pongo abelii... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660190 ID=EY660190; Name=EY660190; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGCCACGGCGCAGATCCGAGGAGTTTGGTAACCCTAGCAAC
TATTTTCTCTTAAATCAATCTTCTCCTTCTCTTTGAAGAAAAAAGAAAAC
CAACTCTTTCTCTCGATTTTAATCACCATCATCAAAGCTTTGCAGATATG
GCTGGTTTGGCACCCGAAGGATCTCAATTTGATGCTCGTCAGTATGACAC
CAAGATGAATGAACTGCTCTCTACTGATGGGCAAGATTTCTTCACTTCTT
ATGATGAAGTTTATGACAGTTTTGATGCAATGGGACTGCAGGAAAACCTT
TTGAGGGGAATCTATGCCTATGGGTTTGAGAAGCCCTCTGCTATTCAGCA
AAGGGGAATTGTTCCCTTCTGCAAGGGACTTGACGTCATTCAGCAGGCTC
AGTCTGGAACTGGGAAAACAGCAACTTTCTGCTCTGGAATTTTGCAGCAA
CTTGATTATGGTCTTGTCCAATGTCAGGCCCTGGTATTGGCACCCACTAG
GGAACTAGCTCAACAGATTGAGAAAGTAATGAGGGCACTTGGTGATTATC
TTGGTGTTAAGGTTCATGCTTGTGTCGGTGGGACAAGTGTTCGCGAGGAT
CAGCGCATTCTTCAAGCTGAGTGTCATGTTGTTGTTGGCACTCCTGGTCG
TGTGTTTGACATGCTGCGCCGACAGTCTTTACGCCCTGATTACATTAAGA
TGTTTGTACTGGATGAGGCTGATGAAATGCTTTCCCGTGGTTTTAAGGAT
CAGATCTATGATATTTTCCAGCTGCTTTCAGCTTAAGTTCANGTGGGGGG
TTTCTCTGCTACATGGCTCCCTGAGCCTTGAGATTACAAGGAAGTTATGG
AACAGCCTGGGAAAATCTGGNTAACCGGATGAACTCCCCCTGAGGGATCA
GCAATTTATGTC
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