EY660190

Overview
NameEY660190
Unique NameEY660190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: DBP2_MAGGR (ATP-dependent RNA helicase DBP2 OS=Magnaporthe grisea GN=DBP2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.703e-18
Identity = 63/192 (32.81%), Postives = 90/192 (46.88%), Query Frame = 1
Query:  265 DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATWLPE 825
            ++FD  G    ++  + A GF  P+AIQ +G      G DV+  A++G+GKT T+C   +  ++   +         L+LAPTRELA QI+  +   G    ++     GG       R L     V + TPGR+ DML         +   VLDEAD ML  GF+ QI  I   +        +SATW  E
Sbjct:  125 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKE 316          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: DBP1_CANGA (ATP-dependent RNA helicase DBP1 OS=Candida glabrata GN=DBP1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.703e-18
Identity = 64/187 (34.22%), Postives = 91/187 (48.66%), Query Frame = 1
Query:  256 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG-------------LVQC--QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQ 771
            E    F +  L E LL  +    F KP+ +Q+  I    K  D++  AQ+G+GKT  F   +L +L                + +C   ALVLAPTRELA QI    +       VK +   GG  + +  R +   C+++V TPGR+ D+L R  +    +K  VLDEAD ML  GF+ QI  I +
Sbjct:  135 EAITEFKSPPLDELLLENVELANFSKPTPVQKYSIPIVTKNRDLMACAQTGSGKTGGFLFPVLSELFLNGPAPLPEHTRHSYMRKCYPSALVLAPTRELAIQIFDEAKKYTYRSWVKPYVVYGGAPIGQQMRDMDRGCNLLVATPGRLNDLLERGKISLVNVKYLVLDEADRMLDMGFEPQIRHIVE 321          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: SRMB_ECOLI (ATP-dependent RNA helicase srmB OS=Escherichia coli (strain K12) GN=srmB PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18
Identity = 56/170 (32.94%), Postives = 84/170 (49.41%), Query Frame = 1
Query:  268 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DYGLVQC---QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDI 765
            +F  + L E+LL  +   GF +P+AIQ   I P   G DV+  A +GTGKTA +    LQ L D+   +    + L+L PTRELA Q+    R L  +  + +    GG +      +      +VV T GR+   ++ ++     ++  +LDEAD ML  GF   I  I
Sbjct:    5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHI 174          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: RH10_ORYSJ (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica GN=Os03g0669000 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18
Identity = 66/188 (35.11%), Postives = 96/188 (51.06%), Query Frame = 1
Query:  268 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-----DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLR-RQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSAT 813
            +F  +G+   L+    A G+++P+ IQ   I    +G D+I   Q+G+GKT  F   I+Q L        L  C   VL+PTRELA QI +   ALG  +G+     VGG    +    L    H+VVGTPGR+ D L   +    + +K  VLDEAD++L+  F+  + DI  ++        FSAT
Sbjct:   42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFAC---VLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTFLFSAT 226          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: PRP28_CRYNE (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus neoformans GN=PRP28 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18
Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 1
Query:  286 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--------DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA 783
            +   +L  I   G+++PS IQ++ I    +  D+I  A++G+GKTA F   +L  +        D   +   AL++APTRELAQQIE   R     LG K  + VGG SV E Q  L+    +++ TPGR+ DM+ +  L     +  V+DEAD M+  GF+  +  I   + A
Sbjct:  322 IPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPA 495          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: DBP8_DEBHA (ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii GN=DBP8 PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18
Identity = 62/176 (35.23%), Postives = 86/176 (48.86%), Query Frame = 1
Query:  268 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQ------SLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL 777
            SF+ +G+ + L   + +     P+ IQ   I    KG D I  A++G+GKT  F + +L Q          LVL PTRELA QI +   ALG  + +KV   VGG  + +    LQ   H VV TPGR+ D +          LR   +K  +LDEAD +LS  F   +   F +L
Sbjct:    2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPSGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALELQRRPHFVVATPGRLADHILNSGEDTVCGLR--RVKYLILDEADRLLSNSFGGDLERCFNIL 175          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: DBP4_EMENI (ATP-dependent RNA helicase dbp4 OS=Emericella nidulans GN=dbp4 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18
Identity = 63/173 (36.42%), Postives = 98/173 (56.65%), Query Frame = 1
Query:  262 YDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL------DY-GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDY-IKMFVLDEADEMLSRGFKDQI 756
            Y+SF  + + E  L G+ +  F+  + IQ R I    KG DV+  A++G+GKT  F   IL+ L      D+ GL    AL+++PTRELA QI +V+R +G Y        +GG S++E+Q  L    +++V TPGR+   L + +    Y ++M VLDEAD ++  GF+  +
Sbjct:   47 YESFSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENLYRKQWSDHDGL---GALIISPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERL-GRMNILVCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTV 215          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: DBP2_ENCCU (ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi GN=DBP2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.224e-18
Identity = 66/199 (33.17%), Postives = 94/199 (47.24%), Query Frame = 1
Query:  244 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGGFSATW 816
            T+       F+  G    ++  +   GF +P+AIQ +G      G D++  AQ+G+GKT +F   IL  L +   Q           LVLAPTREL  QI+KV+        ++  A  GG S +   R L     VV+ TPGR+ D+  +       +   VLDEAD ML  GF+ Q+  I    +A      +SATW
Sbjct:   80 TNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSF---ILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSATW 275          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: DBP8_EMENI (ATP-dependent RNA helicase dbp8 OS=Emericella nidulans GN=dbp8 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 75/231 (32.47%), Postives = 110/231 (47.62%), Query Frame = 1
Query:  208 NELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRP----DYIKMFVLDEADEMLSRGFKDQIYDIFQLLSA*VXVGG--------FSATWLPEP*DYKEVMEQPGK 864
            N +L  D  +   + +E  +SF A+ +   L+  +      KP+AIQ+  I    KG D I  +++G+GKT  F   ILQ+         A++L PTRELA QI + ++A+     +K     GGT +R     L    HVVV TPGR+ D +             ++M VLDEAD +LS G    + D+   LS    + G        F+AT  PE    K + + PGK
Sbjct:   78 NPVLIKDALEIGLNAEE--NSFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQKWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQAIELAGRPHVVVATPGRLADHINTSGTDTVAGLKRVRMVVLDEADRLLSPGPGSMLPDVETCLS---FLPGPSQRQTLLFTATLTPEVRALKSMPQTPGK 303          

HSP 2 Score: 20.4014 bits (41), Expect = 2.350e-18
Identity = 12/34 (35.29%), Postives = 16/34 (47.06%), Query Frame = 3
Query:    6 RPPRRRSEEFGNPSNYFLLNQSSPSL*RKKKTNS 107
            R P+RR     +  +Y       PSL R KK +S
Sbjct:   32 RAPKRRRLSESSTDSYTAAPAPLPSLSRIKKKSS 65          
BLAST of EY660190 vs. ExPASy Swiss-Prot
Match: RHLB_HAES1 (ATP-dependent RNA helicase rhlB OS=Haemophilus somnus (strain 129Pt) GN=rhlB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.904e-18
Identity = 62/174 (35.63%), Postives = 87/174 (50.00%), Query Frame = 1
Query:  271 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY-----GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAECHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL 777
            F  + L  ++ + I   GFE  + IQ   +    KG D+  QAQ+GTGKT  F +     L          Q +AL+LAPTREL  QI      L    G+K     GG    +  +++     +++GT GRV D +++  +R DYI++ VLDEAD M   GF   I DI  LL
Sbjct:   11 FSDLALHRSVQQAIKEKGFEFCTPIQALSLPITLKGQDIAGQAQTGTGKTIAFLTATFHHLLQKNNINSSEQPRALILAPTRELVVQIANDANFLVQATGLKTGLAYGGEGYDKQLKVIDQGIDILIGTTGRVIDYVKQGIIRLDYIQVVVLDEADRMFDLGF---IRDIRYLL 181          
The following BLAST results are available for this feature:
BLAST of EY660190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DBP2_MAGGR1.703e-1832.81ATP-dependent RNA helicase DBP2 OS=Magnaporthe gri... [more]
DBP1_CANGA1.703e-1834.22ATP-dependent RNA helicase DBP1 OS=Candida glabrat... [more]
SRMB_ECOLI2.224e-1832.94ATP-dependent RNA helicase srmB OS=Escherichia col... [more]
RH10_ORYSJ2.224e-1835.11DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sa... [more]
PRP28_CRYNE2.224e-1835.06Pre-mRNA-splicing ATP-dependent RNA helicase PRP28... [more]
DBP8_DEBHA2.224e-1835.23ATP-dependent RNA helicase DBP8 OS=Debaryomyces ha... [more]
DBP4_EMENI2.224e-1836.42ATP-dependent RNA helicase dbp4 OS=Emericella nidu... [more]
DBP2_ENCCU2.224e-1833.17ATP-dependent RNA helicase DBP2 OS=Encephalitozoon... [more]
DBP8_EMENI2.350e-1832.47ATP-dependent RNA helicase dbp8 OS=Emericella nidu... [more]
RHLB_HAES12.904e-1835.63ATP-dependent RNA helicase rhlB OS=Haemophilus som... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660190 ID=EY660190; Name=EY660190; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGCCACGGCGCAGATCCGAGGAGTTTGGTAACCCTAGCAAC
TATTTTCTCTTAAATCAATCTTCTCCTTCTCTTTGAAGAAAAAAGAAAAC
CAACTCTTTCTCTCGATTTTAATCACCATCATCAAAGCTTTGCAGATATG
GCTGGTTTGGCACCCGAAGGATCTCAATTTGATGCTCGTCAGTATGACAC
CAAGATGAATGAACTGCTCTCTACTGATGGGCAAGATTTCTTCACTTCTT
ATGATGAAGTTTATGACAGTTTTGATGCAATGGGACTGCAGGAAAACCTT
TTGAGGGGAATCTATGCCTATGGGTTTGAGAAGCCCTCTGCTATTCAGCA
AAGGGGAATTGTTCCCTTCTGCAAGGGACTTGACGTCATTCAGCAGGCTC
AGTCTGGAACTGGGAAAACAGCAACTTTCTGCTCTGGAATTTTGCAGCAA
CTTGATTATGGTCTTGTCCAATGTCAGGCCCTGGTATTGGCACCCACTAG
GGAACTAGCTCAACAGATTGAGAAAGTAATGAGGGCACTTGGTGATTATC
TTGGTGTTAAGGTTCATGCTTGTGTCGGTGGGACAAGTGTTCGCGAGGAT
CAGCGCATTCTTCAAGCTGAGTGTCATGTTGTTGTTGGCACTCCTGGTCG
TGTGTTTGACATGCTGCGCCGACAGTCTTTACGCCCTGATTACATTAAGA
TGTTTGTACTGGATGAGGCTGATGAAATGCTTTCCCGTGGTTTTAAGGAT
CAGATCTATGATATTTTCCAGCTGCTTTCAGCTTAAGTTCANGTGGGGGG
TTTCTCTGCTACATGGCTCCCTGAGCCTTGAGATTACAAGGAAGTTATGG
AACAGCCTGGGAAAATCTGGNTAACCGGATGAACTCCCCCTGAGGGATCA
GCAATTTATGTC
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