EY660183

Overview
NameEY660183
Unique NameEY660183
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660183 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.606e-11
Identity = 43/139 (30.94%), Postives = 60/139 (43.17%), Query Frame = 1
Query:  190 DVRLKVLYCGICHTDLANIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 603
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP+  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK
Sbjct:   35 ELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLS-------GYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALK 166          
BLAST of EY660183 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.151e-11
Identity = 56/234 (23.93%), Postives = 87/234 (37.18%), Query Frame = 1
Query:  172 RETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGT-----LDGIIDTXSAVPPF 858
            RE    +  +K  YCG+CHTDL ++KN     +  +  GHE  G V E                     AC +CE C    E  C  ++         G    G  ++ ++ +  Y V+ P+++   AA+ + CAG+T Y  +K  G+                                   +  K   A E LGAD+ +NS + D ++          LD  + T  A  PF
Sbjct:   20 RELKPGEALVKTEYCGVCHTDL-HVKNADFGDVTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL-------NAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKE-LGADAIINSTNVDPIEEVNRLTNNKGLDATVITAVAKTPF 244          
BLAST of EY660183 vs. ExPASy Swiss-Prot
Match: ADH4_KLULA (Alcohol dehydrogenase 4, mitochondrial OS=Kluyveromyces lactis GN=ADH4 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 42/139 (30.22%), Postives = 59/139 (42.45%), Query Frame = 1
Query:  190 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 603
            ++ + V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ C +  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK
Sbjct:   60 EILINVKYSGVCHTDLHAWKGDWPLPVKLPLVGGHEGAGIVVAKGENVKNFEIGDYAGIKWLNGSCMSCELCEQGYESNCLQADLS-------GYTHDGSFQQYATADAVQAAQIPKGTDLAEIAPILCAGVTVYKALK 191          
BLAST of EY660183 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 42/139 (30.22%), Postives = 57/139 (41.01%), Query Frame = 1
Query:  190 DVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 603
            ++ + V Y G+CHTDL   K +W      P+V GHE AG V                       +C +CE C    E+ CP   L+       G    G +  +  A+       P    L   AP+LCAG+TVY  LK
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKALK 164          
The following BLAST results are available for this feature:
BLAST of EY660183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADH1_KLULA3.606e-1130.94Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
ADH_STAEQ6.151e-1123.93Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH4_KLULA8.034e-1130.22Alcohol dehydrogenase 4, mitochondrial OS=Kluyvero... [more]
ADH2_KLUMA8.034e-1130.22Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660183 ID=EY660183; Name=EY660183; organism=Citrus sinensis; type=EST; length=946bp
ATGGACGCCTGCGGACCGGTCCGGATTCCCTCCCCGACCCACGCGTCCGG
ATAACATTGCCGTTCTCTCATCCAAATGGCAAAGTCACCAGAAGAAGAAC
ATCCAGTAAAGGCCTTCGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTC
TCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCT
GAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCGCCAACATCAAGA
ATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCA
GGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGA
TAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGCTGCGAGAGCT
GTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGT
TCCATTAACACTGACGGAACAATCACATTCGGAGGCTACTCTGATCACAT
GGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTG
ATGCTGCTGCTCCTCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTG
AAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCATCGTTGGCCT
TGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTTTGGGGCCA
AAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGAAGCTCTTGAA
CATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTGACCAATTGCA
GGGTGCCATGGGCACATTGGATGGTATTATTGACACGNTGTCCGCTGTGC
CCCCATTTTTGCATTGCTCGGTCTATTAAAGTCCCAGGCCAGCTTGTTCT
GGGTGGTGCTCCGGACACCACTCNAGCTACTGTGATTCCCTAATTA
back to top