EY660166

Overview
NameEY660166
Unique NameEY660166
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660166 vs. ExPASy Swiss-Prot
Match: LX12L_RAT (Arachidonate 12-lipoxygenase, leukocyte-type OS=Rattus norvegicus GN=Alox12l PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.768e-18
Identity = 81/312 (25.96%), Postives = 132/312 (42.31%), Query Frame = 3
Query:   24 EPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-----EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFPTGQQLQE*TCQMKIQLENFGKHSFEKLKMHFCTP--SPIKIKPF*VLARSD--LLPTHSPDEESFRKGKEPAWGENPALTAHPKXLRQG----DGTLRIIGERMGIPF 920
            E + +AT R L  +HP+++LL PHL YT+E+N   R  LIS  G  +   S G     +   +  + +      +     P DL +RG+            L I+   +AKD L LW I+ ++V    N +Y     V+ D ELQ+W  EI  +G    +D  +   L++       +T  I+  +  H++V+ GQ  +  + P         C M++      + + EKL      P  S ++I    +L R    ++P     EE F          NP   A  K  R+     D  + I  + + IP+
Sbjct:  370 ELFAVATMRCLPSVHPVFKLLVPHLLYTMEINVRARSDLISERGFFDKAMSTGGGGHLDLLKQAGAFL-----TYCSLCPPDDLAERGL------------LDIETCFYAKDALRLWQIMNRYVVGMFNLHYKTDKAVQDDYELQSWCREITDIGLQGAQDRGFPTSLQSRAQACYFITMCIFTCTAQHSSVHLGQLDWFYWVPNA------PCTMRLPPPTTKEATMEKLMATLPNPNQSTLQINVVWLLGRRQAVMVPLGQHSEEHF---------PNPEAKAVLKKFREELAALDKEIEIRNKSLDIPY 649          
BLAST of EY660166 vs. ExPASy Swiss-Prot
Match: LOX15_PONAB (Arachidonate 15-lipoxygenase OS=Pongo abelii GN=ALOX15 PE=2 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 3.015e-18
Identity = 60/199 (30.15%), Postives = 96/199 (48.24%), Query Frame = 3
Query:   24 EPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFP 620
            E  ++AT R L  +HPI++L+ PHLRYTLE+N   R  L+S  G+ +   S G                +     P DL  RG+         G+K +     +A+D L LW I+ ++V   V+ +Y     V+ D ELQ W  EI  +G    +D  +   L++   +   +T  I+  +G HA+V+ GQ  + ++ P
Sbjct:  369 EVIVVATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGLL--------GVKSSF----YAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIGLQGAQDRGFPVSLQSRDQVCHFVTMCIFTCTGQHASVHLGQLDWYSWVP 555          
BLAST of EY660166 vs. ExPASy Swiss-Prot
Match: LOX12_BOVIN (Arachidonate 12-lipoxygenase, 12S-type OS=Bos taurus GN=ALOX12 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.015e-18
Identity = 61/204 (29.90%), Postives = 97/204 (47.55%), Query Frame = 3
Query:   24 EPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-----EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFP 620
            E   +AT R L  +HP+++LL PHLRYT+E+N   R  L+S  GV +   S G     E      + +      +     P DL  RG+         G+K +     +A+D L LW IL ++V   V+ +Y     V  D ELQAW  +I  +G    +D  +   L++   L   +T  I+  +G H++ + GQ  + ++ P
Sbjct:  370 EVIAVATMRCLPSIHPMFKLLIPHLRYTMEINIRARTGLVSDSGVFDQVVSTGGGGHVELLQRAGAFL-----TYSSFCPPDDLADRGLL--------GVKSSF----YAQDALRLWEILSRYVEGIVSLHYKTDESVRDDIELQAWCRDITEIGLLGAQDRGFPVTLQSKDQLCHFVTMCIFTCTGQHSSTHLGQLDWYSWVP 556          
BLAST of EY660166 vs. ExPASy Swiss-Prot
Match: LOX15_HUMAN (Arachidonate 15-lipoxygenase OS=Homo sapiens GN=ALOX15 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.938e-18
Identity = 60/199 (30.15%), Postives = 95/199 (47.74%), Query Frame = 3
Query:   24 EPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPGEYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFP 620
            E  ++AT R L  +HPI++L+ PHLRYTLE+N   R  L+S  G+ +   S G                +     P DL  RG+         G+K +     +A+D L LW I+ ++V   V+ +Y     V+ D ELQ W  EI  +G    +D  +   L+    +   +T  I+  +G HA+V+ GQ  + ++ P
Sbjct:  369 EVIVVATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGLL--------GVKSSF----YAQDALRLWEIIYRYVEGIVSLHYKTDVAVKDDPELQTWCREITEIGLQGAQDRGFPVSLQARDQVCHFVTMCIFTCTGQHASVHLGQLDWYSWVP 555          
BLAST of EY660166 vs. ExPASy Swiss-Prot
Match: LOX12_PIG (Arachidonate 12-lipoxygenase, 12S-type OS=Sus scrofa GN=ALOX12 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.496e-17
Identity = 57/204 (27.94%), Postives = 98/204 (48.04%), Query Frame = 3
Query:   24 EPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-----EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFP 620
            E   +AT R L  +HPI++LL PH RYT+E+N   R+ L+S  G+ +   S G     E     ++++      +     P DL  RG+            L ++   +A+D L LW ++ ++V   V+ +Y     V+ D ELQAW  E   +G    +D  +   L++ + L   +T  I+  +G H++ + GQ  +  + P
Sbjct:  370 EVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALL-----TYSSFCPPDDLADRGL------------LGVESSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDRGFPVSLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVP 556          
BLAST of EY660166 vs. ExPASy Swiss-Prot
Match: LOX15_RABIT (Arachidonate 15-lipoxygenase OS=Oryctolagus cuniculus GN=ALOX15 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.954e-17
Identity = 55/204 (26.96%), Postives = 98/204 (48.04%), Query Frame = 3
Query:   24 EPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-----EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFP 620
            E + +AT R L  +HP+++L+ PHLRYTLE+N   R+ L+S  G+ +   S G     +   +  + +  + +       P DL  RG+            L ++   +A+D L LW I+ ++V   +  YY     V  D ELQ+W  EI  +G    + + +   L++       +T  I+  +G H++++ GQ  +  + P
Sbjct:  370 EVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSF-----CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVP 556          
BLAST of EY660166 vs. ExPASy Swiss-Prot
Match: LOX12_RABIT (Arachidonate 12-lipoxygenase, 12S-type OS=Oryctolagus cuniculus GN=ALOX12 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.954e-17
Identity = 55/204 (26.96%), Postives = 98/204 (48.04%), Query Frame = 3
Query:   24 EPYIIATNRQLSVMHPIYRLLHPHLRYTLELNAIGRDILISAGGVIENTFSPG-----EYCMEMSSVIYDKQWRFDEQALPKDLMKRGMAVEDPNARHGLKLTIDDYPFAKDGLDLWGILKQWVTDYVNHYYPDQSLVESDDELQAWWTEIRTVGHADKKDEPWWPVLKTPQNLIEILTTIIWVASGHHAAVNFGQYTYAAYFP 620
            E + +AT R L  +HP+++L+ PHLRYTLE+N   R+ L+S  G+ +   S G     +   +  + +  + +       P DL  RG+            L ++   +A+D L LW I+ ++V   +  YY     V  D ELQ+W  EI  +G    + + +   L++       +T  I+  +G H++++ GQ  +  + P
Sbjct:  370 EVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSF-----CPPDDLADRGL------------LGVESSFYAQDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVP 556          
The following BLAST results are available for this feature:
BLAST of EY660166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LX12L_RAT1.768e-1825.96Arachidonate 12-lipoxygenase, leukocyte-type OS=Ra... [more]
LOX15_PONAB3.015e-1830.15Arachidonate 15-lipoxygenase OS=Pongo abelii GN=AL... [more]
LOX12_BOVIN3.015e-1829.90Arachidonate 12-lipoxygenase, 12S-type OS=Bos taur... [more]
LOX15_HUMAN3.938e-1830.15Arachidonate 15-lipoxygenase OS=Homo sapiens GN=AL... [more]
LOX12_PIG1.496e-1727.94Arachidonate 12-lipoxygenase, 12S-type OS=Sus scro... [more]
LOX15_RABIT1.954e-1726.96Arachidonate 15-lipoxygenase OS=Oryctolagus cunicu... [more]
LOX12_RABIT1.954e-1726.96Arachidonate 12-lipoxygenase, 12S-type OS=Oryctola... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660166 ID=EY660166; Name=EY660166; organism=Citrus sinensis; type=EST; length=943bp
TCCTCGACCCACGCGTCCGGGTAGAACCTTACATAATTGCTACCAATCGA
CAACTCAGTGTGATGCATCCAATCTATAGATTGTTGCATCCTCATCTTCG
ATACACATTGGAGCTCAATGCTATAGGTCGGGATATACTTATTAGTGCTG
GTGGAGTCATTGAAAACACATTCTCACCTGGAGAATATTGTATGGAGATG
AGTTCTGTTATCTATGATAAGCAATGGCGATTTGACGAACAAGCACTCCC
CAAAGACCTTATGAAGAGGGGAATGGCCGTTGAAGATCCAAATGCTCGAC
ACGGCTTAAAGCTAACAATTGACGACTATCCTTTTGCCAAGGACGGTCTC
GATCTATGGGGTATCTTAAAACAATGGGTTACCGATTATGTGAATCACTA
CTATCCTGATCAAAGTCTTGTCGAGTCTGATGATGAACTCCAAGCTTGGT
GGACTGAAATTCGAACTGTCGGACACGCTGACAAAAAGGATGAACCTTGG
TGGCCTGTCCTGAAAACCCCTCAGAATTTGATTGAAATCTTAACAACTAT
CATTTGGGTAGCATCTGGTCACCATGCAGCTGTAAACTTTGGCCAATACA
CATATGCAGCCTACTTCCCCACAGGCCAACAATTGCAAGAGTAAACATGC
CAGATGAAGATCCAACTGGAAAATTTTGGAAAACATTCATTTGAAAAACT
GAAGATGCACTTTTGTACACCTTCCCCAATCAAGATCAAGCCATTCTAGG
TATTAGCACGCTCCGATTTGCTACCGACTCATTCCCCTGATGAGGAGTCC
TTTAGGAAAGGTAAAGAACCAGCATGGGGTGAAAATCCAGCATTAACAGC
GCATCCAAAAANTTTACGGCAAGGTGATGGAACTCTGAGGATTATTGGTG
AAAGGATGGGAATACCCTTTGGGGATAGAAAGGAACTTGGGTG
back to top