EY660164

Overview
NameEY660164
Unique NameEY660164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.920e-67
Identity = 119/215 (55.35%), Postives = 151/215 (70.23%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC--PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            +++KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIRVYKNS + P    FP  +PM ++S++W ADDWATRGGLEK DW KAPF + Y+DF +EGC    P PA  ++   NWW+  +   L+  +   Y WV+ N ++YDYC D  R+P  P EC
Sbjct:   72 MKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWEC 286          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.278e-67
Identity = 117/210 (55.71%), Postives = 152/210 (72.38%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            + IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y+ILWN + IVF+VD++PIR +KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A Y+ F I+GC     A  CA+    WW+   ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:   82 MHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 290          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 1.376e-65
Identity = 117/212 (55.19%), Postives = 147/212 (69.34%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGP---ANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            ++IKLV GDSAGTVTAFYM+S+  N  +E DFEFLGN TG+PY VQTNIY NG G+REQR+NLWFDP  ++H Y+ILW+   +VF VD+ PIRV KN      PF  +Q MGVYS++W ADDWAT+GGL K DWS APF A Y++F I+ C +P     + C  +   WW+      L+  +  +  WVR NHMIYDYC D +R+PV P EC
Sbjct:   74 IQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFPVTPLEC 284          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.741e-60
Identity = 108/212 (50.94%), Postives = 144/212 (67.92%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPG--NWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 627
            ++IKL+ G S GTV A+YM+S+  N RDE+DFEFLGN  GQPY +QTN+YA G  +RE+R++LWFDPA D+H Y+ILWN H IVF VD +PIR+Y+N G     +P  QPM V ++LW  + WATRGG +KIDWSK PF A + D+ I+ C   G  +  +     NWW  N + +LT ++ R ++WVR  H+IYDYC D  R+    P EC
Sbjct:   84 MKIKLIRGSSQGTVVAYYMSSDQPN-RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKNEFSSLTRVQKRWFKWVRKYHLIYDYCQDYGRFNNKLPKEC 294          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.878e-60
Identity = 105/210 (50.00%), Postives = 142/210 (67.62%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 627
            +RIK+  G++ G VTAFY+ S      DE+DFEFLGN  G+P T+QTN++ NG+G+RE+R  LWF+P   YH Y +LWN + IVFYVD++PIRVYKN     +P ++PM V ++LW  DDWAT GG  K++WS +PF A++RDF + GC + G +N      +   WW A NYQ L+  E + Y  VR  +M YDYCTD+S+Y  PP EC
Sbjct:   82 MRIKVPSGNTGGIVTAFYLTSKGGG-HDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.065e-60
Identity = 107/211 (50.71%), Postives = 148/211 (70.14%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPEC 627
            V++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  D+H Y I+WN   ++F +D +PIR +KNS     PFP +QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++ C    G ++C++N  +W+     Q L      R +W +  +M+Y+YCTDK R+P   PPEC
Sbjct:   77 VQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKSSCSAN-SSWFT----QVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPEC 281          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.128e-59
Identity = 113/214 (52.80%), Postives = 147/214 (68.69%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCASNPGNWW---EANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 627
            +++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKG+REQ+  LWFDP  ++H Y+++W   HI+F VD+VPIRV+ N+ +   PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C V  G + C     + +   E+     L A   RR RWV+   MIYDYC+D  R+P   PPEC
Sbjct:   74 MQLKLVAGNSAGTVTAYYLSSEGPT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.283e-59
Identity = 115/219 (52.51%), Postives = 143/219 (65.30%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-------PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPECLA 633
            +++KLVPG+SAGTVT  Y+ S      DE+DFEFLGN +G+PYT+ TN+Y  GKGD+EQ+  LWFDP A++H YTILWN   I+F VD  PIR +KN  S    FP N+PM +YS+LW ADDWATRGGL K DWSKAPF A YR F  E C         P  +   +  G+W      Q L +   +R RWV+ N+MIY+YCTD  R+P   P ECLA
Sbjct:   70 MQMKLVPGNSAGTVTTLYLKS-PGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGSWLS----QELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKECLA 283          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 5.600e-59
Identity = 111/211 (52.61%), Postives = 143/211 (67.77%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-PVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 627
            +++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+R +KN       +P  QPM +YS+LW AD WATRGGL K DWSKAPF A YR+F  + C    G ++C +    W+     Q L      + R V+  +MIY+YCTD  R+P   P EC
Sbjct:   77 MQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGRSSCPAGSPRWFS----QRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKEC 282          
BLAST of EY660164 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.552e-59
Identity = 110/213 (51.64%), Postives = 145/213 (68.08%), Query Frame = 1
Query:    7 VRIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA---RRYRWVRLNHMIYDYCTDKSRYPVP-PPEC 627
            +++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  ++H Y+I+W   HI+F VD++PIRV+ N+ +   PFP +QPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C     + C     + +     Q  T + A   RR RWV+   MIY+YC+D  R+P   PPEC
Sbjct:   75 MQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC--TASSGCDPKFKSSFGDGKLQVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPEC 284          
The following BLAST results are available for this feature:
BLAST of EY660164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH8_ARATH1.920e-6755.35Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH4.278e-6755.71Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH1.376e-6555.19Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH10_ARATH1.741e-6050.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH3.878e-6050.00Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH20_ARATH5.065e-6050.71Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH16_ARATH1.128e-5952.80Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH3.283e-5952.51Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH5.600e-5952.61Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH9.552e-5951.64Probable xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-019-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660164 ID=EY660164; Name=EY660164; organism=Citrus sinensis; type=EST; length=896bp
CCACGCGTCCGGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCAC
TGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGATT
TTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACCAAT
ATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTT
TGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCACC
ATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAAACAGT
GGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCGACGCT
GTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGATT
GGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGATATTGAGGGC
TGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGTG
GGAGGCAAATAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAGATACA
GATGGGTTCGTCTCAACCACATGATCTATGATTATTGCACTGATAAATCA
AGATACCCAGTACCCCCACCGGAATGCCTTGCCGGCATATAAATTCAACC
TGCCAATTAATTAAGCAGTTGGACGGTACTCCATATCCGTATCATATCAT
GTATATTACTTCACGTACACGTCCTTTGTATTATTCCCTATTCGTGTGAA
AAGACTTATACGCATATCAGGGGAGGGGCAGGAGGGGAAATAAACATCGT
GGGCTCTTAATGTGGATATGGGAGTGGGAATATGTGGGTATTCTGCTTCG
CTTGTACATATATAAGTCTGAATTTGATGCACAGGATCTGTAGCCA
back to top