EY660014

Overview
NameEY660014
Unique NameEY660014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA2_CLOAB (Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS=Clostridium acetobutylicum GN=gatA2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 57/173 (32.95%), Postives = 79/173 (45.66%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWANFRSSMHPXGFCARVXKEEIICSISRSLGGRAVAQQYR*QPTGL 763
            I + T++ L+ A     L S  +V+ Y   I R  P +N  I +  D AL +A + D  + +     +  L GIPI +KDNI T D + TT  S  L   V P DA V+ KL    AII+GK ++ E+A   SS     F       +I      S GG A     +  P  L
Sbjct:    3 ILDMTVEQLRNAILDKHLKSEDIVKAYFDNIKRNEPEINAYITLCEDYALKEAKDVD--KKIANGDKVGRLAGIPIAIKDNICT-DGIKTTCASKMLYDFVPPYDATVIKKLKAEDAIIIGKVNMDEFA-MGSSTENSAFKITKNPRDITRVPGGSSGGSAAVVAAKMAPISL 171          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_PSEAE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            + + T+ ++  A    + ++ +L    LG I +L+P LN  I +  D A++QA  AD  R   A G    L G PI  KD   T+  + T+ GS  L   V P DA VV KL  AGA+ LGK ++ E+A
Sbjct:    2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR---ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTLGKLNMDEFA 126          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_PSEAB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            + + T+ ++  A    + ++ +L    LG I +L+P LN  I +  D A++QA  AD  R   A G    L G PI  KD   T+  + T+ GS  L   V P DA VV KL  AGA+ LGK ++ E+A
Sbjct:    2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR---ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLAAAGAVTLGKLNMDEFA 126          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_PSEA8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas aeruginosa (strain LESB58) GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            + + T+ ++  A    + ++ +L    LG I +L+P LN  I +  D A++QA  AD  R   A G    L G PI  KD   T+  + T+ GS  L   V P DA VV KL  AGA+ LGK ++ E+A
Sbjct:    2 LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR---ANGENGALLGAPIAHKDLFCTQG-VRTSCGSKMLDNFVSPYDATVVEKLAAAGAVTLGKLNMDEFA 126          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_NITEU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas europaea GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 2
Query:  257 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            A+++ L L   + K++S +L   +L  I  LNP LN  I ++ + +L QA+ AD  + + A  S P L GIPI  KD    +  + TT GS  L   V P DA VV +  +AG + LGK ++ E+A
Sbjct:    4 ASLRQLSLLLSEKKISSTELTSEFLSRIKALNPDLNAFITIDEEKSLDQANVAD--KMIAAGRSTP-LTGIPIAQKDIFCARGWL-TTCGSKMLSNFVSPYDATVVERFDQAGMVNLGKTNMDEFA 125          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_MORCA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moraxella catarrhalis GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 46/129 (35.66%), Postives = 71/129 (55.04%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            +   ++ +L    K  + +S +LVE +   I+RL+  +N  I  + D AL+QA  AD    ++A G    L G+P+  KDN+ TK  + TTAGS  L   V P DA VV  +  +G + LGK ++ E+A
Sbjct:    4 LHHLSVHELADGLKNKQFSSHELVEHFANRINRLDGQINSFITKDFDNALAQAKLAD---KLRAKGDNRPLLGVPMAHKDNLCTKGVL-TTAGSKMLYNFVSPYDATVVDSIANSGFVSLGKLNMDEFA 128          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_DECAR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dechloromonas aromatica (strain RCB) GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  257 ATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPD-ALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLX-EAGAIILGKASLSEWA 631
            A++K+L LA    K++S +L   +L  I RLNP LN  + V+ + +L  A +AD      A G+   L GIPI  KD    +  ++T  GS  L   V P DA V+ K+  EAG + LGK ++ E+A
Sbjct:    4 ASLKELSLALAAKKVSSVELSSLFLDRIERLNPTLNAFVTVDREKSLQMARDADARI---AAGTAGPLTGIPIAQKDIFCAEGWLST-CGSKMLANFVSPYDATVIRKMHAEAGLVSLGKTNMDEFA 126          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPDALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            +   T+   Q A     +T+ +L E  L  I+   P +   + + PDA   A  A  ER  +   SL  L GIPI +KD I T D + TTAGS  L G   P +A V+ +L  AGA+++GK +  E+A
Sbjct:    4 LHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGR-SLGPLDGIPIAIKDVICT-DGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFA 129          
BLAST of EY660014 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 2
Query:  248 IREATIKDLQLAFKQNKLTSRQLVEFYLGEIHRLNPLLNGVIEVNPDALSQADEADCERSVKAPGSLPGLHGIPILLKDNIATKDKMNTTAGSYALLGSVVPRDAGVVTKLXEAGAIILGKASLSEWA 631
            +   T+   Q A     +T+ +L E  L  I+   P +   + + PDA   A  A  ER  +   SL  L GIPI +KD I T D + TTAGS  L G   P +A V+ +L  AGA+++GK +  E+A
Sbjct:    4 LHHLTVTAAQAALAAGDITAVELTEACLARINATEPTIRAFLHLTPDAALAAARAADERRQQGR-SLGPLDGIPIAIKDVICT-DGVPTTAGSRILAGFRPPYNATVIERLVAAGAVLVGKLNCDEFA 129          
The following BLAST results are available for this feature:
BLAST of EY660014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
GATA2_CLOAB6.027e-1132.95Glutamyl-tRNA(Gln) amidotransferase subunit A 2 OS... [more]
GATA_PSEAE7.871e-1136.43Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_PSEAB7.871e-1136.43Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_PSEA87.871e-1136.43Glutamyl-tRNA(Gln) amidotransferase subunit A OS=P... [more]
GATA_NITEU7.871e-1137.30Glutamyl-tRNA(Gln) amidotransferase subunit A OS=N... [more]
GATA_MORCA7.871e-1135.66Glutamyl-tRNA(Gln) amidotransferase subunit A OS=M... [more]
GATA_DECAR7.871e-1137.80Glutamyl-tRNA(Gln) amidotransferase subunit A OS=D... [more]
GATA_CHLSY7.871e-1135.94Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_CHLAA7.871e-1135.94Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660014 ID=EY660014; Name=EY660014; organism=Citrus sinensis; type=EST; length=936bp
CCTAAACAGAGGCGTCCGGCAAAAGTGATTACAATATATAAACCCGTTTG
GGGCAGCTGCGCTGCCACCGCGCAGCTGCGCTGCCTCCGCCCAGCTGCTC
CCCAGGCCAATTCTAAAGGAATATTCCCCTAAAATTGTTTAACAAAAGAC
TACCAATAATAATATGTCATTGACCTTTCCTTTCTTTTCACATCTACTCC
TGATTCTTCTAGCCATGTCAACCGATCGATCAGACGATGAATTCCCAATA
AGAGAAGCAACTATCAAGGATCTCCAGCTCGCGTTCAAGCAAAACAAGCT
TACGTCCCGGCAGCTGGTTGAATTTTACCTCGGAGAAATCCACAGGCTCA
ACCCGCTGCTCAACGGAGTCATAGAGGTGAACCCTGATGCGCTATCCCAA
GCTGATGAAGCTGACTGCGAGCGCAGTGTTAAGGCACCAGGTTCACTGCC
CGGTTTACATGGGATTCCTATTCTTCTCAAGGATAACATTGCAACCAAGG
ACAAGATGAACACCACTGCTGGCTCGTATGCTCTGCTCGGCTCAGTCGTG
CCCCGGGATGCTGGTGTGGTGACCAAATTGANGGAAGCTGGTGCCATTAT
TCTGGGAAAGGCTAGCTTGAGTGAGTGGGCTAATTTTAGATCCTCAATGC
ACCCAANTGGTTTTTGTGCTAGGGTGGNCAAGGAAGAAATCATATGTTCT
ATCAGCAGATCCCTGGGGGGTCGAGCAGTGGCTCAGCAATATCGGTAGCA
GCCAACTGGGTTGCAGTGTCCCTGGGAACTGAACTGATGGTCCATTCTCT
CCCCTCCAGGTCCAACTTAGGAGTGGGATCCAACCAACCGTGGGCCTCCC
CAGCGAGCCGGAGCCTCCCTTTACTCCTAAAAGGAACCCGGTGGGGATGG
GGAACCTTGCCCTTCAATTGGATGGTGCACCTTTAA
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