EY659989

Overview
NameEY659989
Unique NameEY659989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 3
Query:  120 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTGLRFFTVYGPWGRPDM 692
            M VLVTG +G++GSH  + L + G  V+ LDN  NS    S+    ++L  KH  F VEGD+ +  L+T++        V+H A    V  ++  P  Y  +N+ G + L+   ++ N + +++++SS++VYG   ++P+ ES  T  P S Y  +K   E+I          + +AL  LR+F   G     DM
Sbjct:    1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNS--KRSVLPVIERLGGKHPTF-VEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMRAANVK-NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIAL--LRYFNPVGAHPSGDM 189          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE_CORGL (UDP-glucose 4-epimerase OS=Corynebacterium glutamicum GN=galE PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 57/187 (30.48%), Postives = 100/187 (53.48%), Query Frame = 3
Query:  120 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWG 680
            M +LVTG AG+VGS  +  L + G  V  +DNF++    ++    +         ++EGD+ND  ++ ++     F  V+H AA++ V  +++ P  Y   N+   + LL+  ++     ++V++S+++ YG    VP +E   T QP + Y ATK + +    +Y   +GLA T LR+F V G +G
Sbjct:    1 MKLLVTGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADAR---------LIEGDVND--VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVN-NLVFSSTAATYGEPDVVPITEDMPT-QPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAYG 174          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE1_PEA (UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 57/164 (34.76%), Postives = 92/164 (56.10%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL---LQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIA 608
            +LVTG+AGF+G+H  + L   G  V  +DNF++    +++R R+ +   L ++  F + GDL +   L KLF    F  V+H A    V  +++NP+ Y  +N+ G +NL EV    N +  +V++SS++VYG   ++P  E  +  Q  + Y  TK   EEIA
Sbjct:    8 ILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTL-GDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCK-KMVFSSSATVYGQPEKIPCVEDFKL-QAMNPYGRTKLFLEEIA 168          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GAL10_PACTA (Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.404e-16
Identity = 63/188 (33.51%), Postives = 98/188 (52.13%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYG----LNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLALTGLRFFTVYG 671
            +LVTG AG++GSH  + L   G  V+ +DN  NS YD  +   R ++L + Q+   + DLND   L ++F + P   VLH AA   V  + + P +Y ++N+ G ++LL+V +  N + +IV++SS++VYG        +P  E H    P + Y  TK   E I    Y +        LR+F   G
Sbjct:    4 ILVTGGAGYIGSHTVVELVNNGYNVVVVDNLVNSSYDVIV---RIEVLTRKQIPFFKIDLNDHDALDQVFKLYPIQAVLHFAALKAVGESTKFPLNYYSNNVGGAISLLKVMEENNVK-NIVFSSSATVYGDATRFENMIPIPE-HCPTGPTNPYGETKITIENIIRDVYANDKSWKCAILRYFNPIG 186          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE3_ARATH (UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 67/195 (34.36%), Postives = 99/195 (50.77%), Query Frame = 3
Query:  123 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQ------KLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASL---YAATKKAGEEI---AHTYNHIYGLALTGLRFFTVYG 671
            +VLVTG AG++GSH  L L + G   + +DN+++    SL+R ++        L  HQV     DL D P L K+F    F  V+H A    V  +++ P  Y  +NI G V LLEV      + ++V++SS++VYG   +VP +E    + P S    Y  TK   EEI    H  +  + + L  LR+F   G
Sbjct:    4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQV-----DLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCK-NLVFSSSATVYGWPKEVPCTE----ESPISATNPYGRTKLFIEEICRDVHRSDSEWKIIL--LRYFNPVG 186          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE_LACHE (UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 57/184 (30.98%), Postives = 94/184 (51.09%), Query Frame = 3
Query:  120 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYG 671
            M VLV G AG++GSH    L K G+ VL LD        +L    +K +     F  +GD+ D  L++K+        V+H AA + V  +++ P  Y  +N+ G ++LL+     N +  +V++SS++ YG+  ++P +E    + P + Y  TK   E+I    +   G+  T LR+F V G
Sbjct:    1 MKVLVIGGAGYIGSHAVRELVKEGNDVLVLD--------ALYTGHRKAVDPKAKFY-QGDIEDTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVK-YLVFSSSAATYGIPKKLPITEDTPLN-PINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAG 173          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GAL10_SCHPO (Bifunctional protein gal10 OS=Schizosaccharomyces pombe GN=gal10 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15
Identity = 64/190 (33.68%), Postives = 98/190 (51.58%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYG----LNTQVPFSESHRTDQPASLYAATKKAGEEI---AHTYNHIYGLALTGLRFFTVYG 671
            +LVTG AG++GSH  + L   G  V+ +DN  NS YD     AR + + +  +   + DL D   L ++FD      V+H AA   V  +M+ P  Y  +NI G + LL V +  +   ++V++SS++VYG     +  +P  ES   D P + Y  TK A E I    HT ++ +  A+  LR+F   G
Sbjct:    8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDLRDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMRE-HRVKTVVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI--LRYFNPIG 190          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE_HAEIN (UDP-glucose 4-epimerase OS=Haemophilus influenzae GN=galE PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 3
Query:  120 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLALTGLRFFTVYG 671
            M +LVTG AG++GSH  + L   G  V+ LDN  +    SL+R +Q  +   +    EGD+ D  LL K+F       V+H A    V  ++Q P  Y  +N+AG + L++  K      + V++SS++VYG    +P +E        + Y  +K   E+I   T       ++T LR+F   G
Sbjct:    1 MAILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVKQ--ITGKEAKFYEGDILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAGVW-NFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKFSMTILRYFNPVG 182          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: GALE_YERPE (UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.799e-15
Identity = 52/162 (32.10%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  120 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI 605
            M VLVTG +G++GSH  + L + G   + LDN  +     L R     L  +   +  GD+ D  LL  +F   P   V+H A    V  ++  P  Y  +N+ G + LLE  ++   + +++++SS++VYG   Q+P+ ES  T  P+S Y  +K   E+I
Sbjct:    1 MYVLVTGGSGYIGSHTCVQLIEAGYKPVILDNLCNSKSSVLARIHS--LTGYTPELYAGDIRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMRAAQVK-NLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQI 159          
BLAST of EY659989 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 60/187 (32.09%), Postives = 83/187 (44.39%), Query Frame = 3
Query:  126 VLVTGAAGFVGSHCSLALKKRGDGVLGL-----DNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYG 671
            V VTG  G +GS+    L ++G  V GL        N Y    +K+            IV G L D  ++ +         V HLAAQA V  A +NP S   +NI G  N+LE C+       ++ ASS   YG    +P+ E+    Q    Y  +K   + I+HTY H YGL +   R   +YG
Sbjct:    9 VFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIKKMN----------IVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENMPL-QGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYG 184          
The following BLAST results are available for this feature:
BLAST of EY659989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GALE_SALTI7.404e-1631.79UDP-glucose 4-epimerase OS=Salmonella typhi GN=gal... [more]
GALE_CORGL7.404e-1630.48UDP-glucose 4-epimerase OS=Corynebacterium glutami... [more]
GALE1_PEA7.404e-1634.76UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE P... [more]
GAL10_PACTA7.404e-1633.51Bifunctional protein GAL10 OS=Pachysolen tannophil... [more]
GALE3_ARATH1.263e-1534.36UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana ... [more]
GALE_LACHE1.649e-1530.98UDP-glucose 4-epimerase OS=Lactobacillus helveticu... [more]
GAL10_SCHPO2.154e-1533.68Bifunctional protein gal10 OS=Schizosaccharomyces ... [more]
GALE_HAEIN3.675e-1531.35UDP-glucose 4-epimerase OS=Haemophilus influenzae ... [more]
GALE_YERPE4.799e-1532.10UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE... [more]
YFNG_BACSU1.069e-1432.09Putative sugar dehydratase/epimerase yfnG OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659989 ID=EY659989; Name=EY659989; organism=Citrus sinensis; type=EST; length=878bp
TGCAGGACCGGTCCGGAATTTTTCGGACGGCGACGCGTNCGCTCCTCTTT
TCTTACAATGGCGGGGNAGAGTGGGAGAAGCAGGTCCGCCACTCTGCCAC
CCCTCGCTCACCCAACGGGATGACCGTTTTGGTCACCGGAGCTGCCGGTT
TCGTCGGATCTCACTGCTCCCTCGCTCTCAAAAAGCGAGGCGATGGCGTT
TTGGGGTTGGATAATTTCAACAGCTATTACGATCCGTCGCTTAAACGGGC
GAGGCAAAAGCTGCTTCAAAAGCATCAAGTCTTCATCGTCGAAGGGGACC
TGAATGACGCTCCCCTGTTAACAAAGCTTTTCGACGTTGTACCTTTCACC
CACGTACTGCACTTAGCAGCACAGGCCGGGGTTCGCTACGCCATGCAGAA
TCCGCAATCTTACGTGGCATCCAACATCGCTGGATTCGTCAACCTGCTCG
AAGTTTGCAAATCGGTGAACCCTCAGCCGTCGATCGTGTGGGCCTCATCG
AGCTCGGTGTACGGCCTCAACACCCAGGTCCCCTTCTCCGAGTCGCACAG
AACCGACCAGCCCGCGAGTTTGTACGCGGCGACTAAGAAAGCCGGGGAGG
AAATCGCCCACACTTACAACCATATTTACGGTCTTGCCCTCACGGGCCTA
AGGTTCTTCACCGTGTACGGCCCCTGGGGGAGACCCGACATGGCTTACTT
CTTCTTCACCAAGATATCTTACAGGGCAAACCATTGATGTGTACAAGACG
CAAGATGACAGGGAGGTGGCGCGTGACTCCCATACATANATGACGAANNG
AAGGGCTGTGCTCGGGCGTTGGACACGGGGGGAAAAACACCGGGGAGCCG
GGGGAAAAAACGGGGCCCCCGCTCGCTG
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