EY659986

Overview
NameEY659986
Unique NameEY659986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP3_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=AGAP3 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 1
Query:  229 LVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGN 447
            L  + ++    N  C DC+A NP WAS+  G  +CI+CS +HR LG H+S VRS +LD W  E L +M   GN
Sbjct:  627 LAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGN 699          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP2_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N +C DC A NPTWAS+  G  +CI+CS +HR+LG H+S VRS +LD W  E   ++   GN+ A
Sbjct:  943 NSICVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLTAIGNDTA 1007          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ACAP1_MOUSE (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Mus musculus GN=Acap1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGN 447
            V  ++++   N  C DC    P WAS+  G+ LCI CS +HRSLGVH S VRS  LDSW  E +K+M   GN
Sbjct:  407 VAAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGN 478          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ACAP1_BOVIN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Bos taurus GN=ACAP1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 1
Query:  232 VFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGN 447
            V  ++++   N  C DC    P WAS+  G+ LCI CS +HRSLGVH S VRS  LDSW  E +K+M   GN
Sbjct:  407 VAAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGN 478          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP2_RAT (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus GN=Agap2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC A NPTWAS+  G  +CI+CS +HR+LG H+S VRS +LD W  E   ++   GN+ A
Sbjct:  937 NSTCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLTAIGNDTA 1001          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP2_MOUSE (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Mus musculus GN=Agap2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC A NPTWAS+  G  +CI+CS +HR+LG H+S VRS +LD W  E   ++   GN+ A
Sbjct:  937 NSTCVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLTAIGNDTA 1001          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: UCP3_SCHPO (UBA domain-containing protein 3 OS=Schizosaccharomyces pombe GN=ucp3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query:  244 LKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFF 468
            +++ S N +C DC+ +   WAS   GIFLC+ C+ +HR LG H+S V+S +LD WS +Q++ M + GN  A  ++
Sbjct:   14 VQSVSGNNLCADCSTRGVQWASWNLGIFLCLRCATIHRKLGTHVSKVKSISLDEWSNDQIEKMKHWGNINANRYW 88          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP4_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4 OS=Homo sapiens GN=AGAP4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1
Query:  223 KNLVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            K +  + ++    N  C DC  +NP WAS+  G+ +CI+CS +HRSLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  440 KAMALQSIQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 517          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGA11_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11 OS=Homo sapiens GN=AGAP11 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.314e-13
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC  +NP WAS+  G+ +CI+CS +HRSLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  340 NSHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 404          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP7_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7 OS=Homo sapiens GN=AGAP7 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC  +NP WAS+  G+ +CI+CS +HRSLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  453 NAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 517          
The following BLAST results are available for this feature:
BLAST of EY659986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
AGAP3_HUMAN1.474e-1345.21Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP2_HUMAN1.474e-1349.23Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
ACAP1_MOUSE1.474e-1348.61Arf-GAP with coiled-coil, ANK repeat and PH domain... [more]
ACAP1_BOVIN1.474e-1348.61Arf-GAP with coiled-coil, ANK repeat and PH domain... [more]
AGAP2_RAT2.514e-1349.23Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP2_MOUSE2.514e-1349.23Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
UCP3_SCHPO4.288e-1341.33UBA domain-containing protein 3 OS=Schizosaccharom... [more]
AGAP4_HUMAN4.288e-1342.31Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGA11_HUMAN7.314e-1349.23Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP7_HUMAN9.552e-1349.23Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659986 ID=EY659986; Name=EY659986; organism=Citrus sinensis; type=EST; length=852bp
TGAGGTACCGGTCCGGAATTTTCATACAGAGGACGNGTNCGGGTTTCTTC
CAAAACAATGAGGAGTGGGGAGGTGTTGTTCCATGACACCTCGTAAGGTT
TATAATCCCATATTCTCGTTCAGGAAAAAATCAAAATCAAAATTTACAAT
CTTGGGGTTTCGTTTTTCGTAATTTTTATTTCATAAAATTCTTTCTCGAT
GGCTTCCGATAATTTGACCGATAAGAACCTTGTTTTCAGAAAACTGAAAG
CAAAATCGGAAAACAAGATGTGTTTTGATTGTAATGCTAAGAACCCGACG
TGGGCCTCGGTGACTTACGGGATCTTTCTCTGCATTGATTGCTCTGCCGT
TCACCGCAGTCTCGGTGTCCACATCAGCTTCGTTAGGTCAACAAATTTAG
ACTCATGGAGTGCTGAGCAGCTGAAAATGATGGTGTATGGAGGAAACAAC
CGTGCACAAGTTTTCTTTAAGCAGCATGGATGGACAGATGGAGGCAAAAT
TGAGGCTAAGTATACCTCAAGAGCTGCTGAATTATACAAGCAGATTCTTG
CAAAAGAAGTTGCTAAAAATATGGCAGAAGAGGCAGGCTTGCCATCATCA
CCGGTTGCCTCGCAGCCGGCACAAGCAGCTAATGCACTTCCAGATGTTAA
GAATCAGGATGCTCCCTAAGAAATTATCANGGAAGGGCAGAAACTCAAGA
CGCTCCTGGNNTCGCAAAAGTTTCTCGTACAGNTCTTACTAGTACCGTCA
AAAAACCACTTGGTGCGAAGAAATCAGGGAAGACTGGGGGGTCTAAGTGC
TCCAAAGCTGACCTCAAGCCCAGTGAAAGCTATATGAGCAGAAGCTGAGG
AA
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