EY659986

Overview
NameEY659986
Unique NameEY659986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP6_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 6 OS=Homo sapiens GN=AGAP6 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.248e-12
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMM 432
            N  C DC  +NP WAS+  G+ +CI+CS +HRSLG H+S VRS  LD W  E  K+M
Sbjct:  453 NAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGPHLSRVRSLELDDWPVELRKVM 509          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGE2_YEAST (ADP-ribosylation factor GTPase-activating protein effector protein 2 OS=Saccharomyces cerevisiae GN=AGE2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  262 NKMCFDCNAK-NPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQL-KMMVYGGNNRAQVFFK 471
            N  C DC A+ +P WAS + G+F+CI C+ +HRSLG HIS V+S +LD+W  E L K++ +  N RA  +++
Sbjct:   20 NSHCADCKAQLHPRWASWSLGVFICIKCAGIHRSLGTHISKVKSVDLDTWKEEHLVKLIQFKNNLRANSYYE 91          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP9_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9 OS=Homo sapiens GN=AGAP9 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC  +NP WAS+  G+ +CI+CS +HRS G  +S VRS  LD W  E  K+M   GN  A
Sbjct:  521 NAHCVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELDDWPVELRKVMSSIGNELA 585          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP8_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8 OS=Homo sapiens GN=AGAP8 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC  +NP WAS+  G+ +CI+CS +H SLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  453 NAHCVDCETQNPKWASLNLGVLMCIECSGIHHSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 517          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGA10_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 10 OS=Homo sapiens GN=AGAP10 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC  +NP WAS+  G+ +CI+CS +HRS G  +S VRS  LD W  E  K+M   GN  A
Sbjct:  476 NAHCVDCETQNPKWASLNLGVLMCIECSGIHRSFGTRLSRVRSLELDDWPVELRKVMSSIGNELA 540          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: CTLFB_HUMAN (Putative centaurin-gamma-like family member 11P OS=Homo sapiens GN=CTGLF11P PE=5 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.086e-12
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C DC  +NP WAS+  G+ +CI+CS +H SLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  461 NAHCVDCETQNPKWASLNLGVLMCIECSGIHCSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 525          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGAP5_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 5 OS=Homo sapiens GN=AGAP5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.801e-11
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRA 456
            N  C D   +NP WAS+  G+ +CI+CS +HRSLG  +S VRS  LD W  E  K+M   GN+ A
Sbjct:  453 NAHCVDYETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLA 517          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: ADAP1_HUMAN (Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens GN=ADAP1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11
Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 1
Query:  241 KLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSAEQLKMMVYGGNNRAQVFFK 471
            +L  +  N  C DC A +P WAS T G+F+C+ CS +HR++   +S V+S  LD+W   Q++ M   GN+ A+  F+
Sbjct:   11 ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFE 86          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGD4_ARATH (ADP-ribosylation factor GTPase-activating protein AGD4 OS=Arabidopsis thaliana GN=AGD4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  244 LKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLD 402
            L+    N  C +CNA  P WAS+  G+ LCI CS VHR+LGVHIS VRS +LD
Sbjct:  473 LRGLPGNNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLD 525          
BLAST of EY659986 vs. ExPASy Swiss-Prot
Match: AGD3_ARATH (ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 1
Query:  262 NKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLD--SWSAEQLKMMVYGGNNRAQVFFKQ 474
            N  C DC A  P WAS+  G+ +CI+CS VHR+LGVHIS VRS  LD   W    + +    GN  A   +++
Sbjct:  513 NDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQALGNTFANTVWEE 585          
The following BLAST results are available for this feature:
BLAST of EY659986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
AGAP6_HUMAN1.248e-1252.63Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGE2_YEAST2.779e-1245.83ADP-ribosylation factor GTPase-activating protein ... [more]
AGAP9_HUMAN3.630e-1247.69Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP8_HUMAN3.630e-1247.69Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGA10_HUMAN3.630e-1247.69Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
CTLFB_HUMAN8.086e-1247.69Putative centaurin-gamma-like family member 11P OS... [more]
AGAP5_HUMAN1.801e-1147.69Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
ADAP1_HUMAN3.073e-1138.96Arf-GAP with dual PH domain-containing protein 1 O... [more]
AGD4_ARATH6.845e-1156.60ADP-ribosylation factor GTPase-activating protein ... [more]
AGD3_ARATH8.940e-1143.84ADP-ribosylation factor GTPase-activating protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659986 ID=EY659986; Name=EY659986; organism=Citrus sinensis; type=EST; length=852bp
TGAGGTACCGGTCCGGAATTTTCATACAGAGGACGNGTNCGGGTTTCTTC
CAAAACAATGAGGAGTGGGGAGGTGTTGTTCCATGACACCTCGTAAGGTT
TATAATCCCATATTCTCGTTCAGGAAAAAATCAAAATCAAAATTTACAAT
CTTGGGGTTTCGTTTTTCGTAATTTTTATTTCATAAAATTCTTTCTCGAT
GGCTTCCGATAATTTGACCGATAAGAACCTTGTTTTCAGAAAACTGAAAG
CAAAATCGGAAAACAAGATGTGTTTTGATTGTAATGCTAAGAACCCGACG
TGGGCCTCGGTGACTTACGGGATCTTTCTCTGCATTGATTGCTCTGCCGT
TCACCGCAGTCTCGGTGTCCACATCAGCTTCGTTAGGTCAACAAATTTAG
ACTCATGGAGTGCTGAGCAGCTGAAAATGATGGTGTATGGAGGAAACAAC
CGTGCACAAGTTTTCTTTAAGCAGCATGGATGGACAGATGGAGGCAAAAT
TGAGGCTAAGTATACCTCAAGAGCTGCTGAATTATACAAGCAGATTCTTG
CAAAAGAAGTTGCTAAAAATATGGCAGAAGAGGCAGGCTTGCCATCATCA
CCGGTTGCCTCGCAGCCGGCACAAGCAGCTAATGCACTTCCAGATGTTAA
GAATCAGGATGCTCCCTAAGAAATTATCANGGAAGGGCAGAAACTCAAGA
CGCTCCTGGNNTCGCAAAAGTTTCTCGTACAGNTCTTACTAGTACCGTCA
AAAAACCACTTGGTGCGAAGAAATCAGGGAAGACTGGGGGGTCTAAGTGC
TCCAAAGCTGACCTCAAGCCCAGTGAAAGCTATATGAGCAGAAGCTGAGG
AA
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