EY659975

Overview
NameEY659975
Unique NameEY659975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659975 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.246e-14
Identity = 43/138 (31.16%), Postives = 72/138 (52.17%), Query Frame = 1
Query:    4 PVRVKEDFNKRYV---GGKAASAPANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRTKMWIQNMXXXXXXXXXXXXXXXXXXXSVCHG 408
            P    ED ++R+V   G    SA A ++N EF   L + ++Y  + P     ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N++     FR+Q  +    +W +N                      CHG
Sbjct:   76 PFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYIGVAFACHG 212          
BLAST of EY659975 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   13 VKEDFNKRYVGGKAASAPANSLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRTKMWIQNM 336
            +K+ F   Y G +A +A   ++N EF S L   ++Y   H E     ++A+ +AQV E+KG+M+ NI+ V  RGEK+ELL+DKTENL   +  F+     +   M ++N+
Sbjct:   82 IKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187          
BLAST of EY659975 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12
Identity = 37/108 (34.26%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   13 VKEDFNKRYVGGKAASAPANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRTKMWIQNM 336
            VK+ F   Y G +A +A   ++N EF S L   +++  ++ + + ++ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F+     +   M ++N+
Sbjct:   82 VKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNV 187          
BLAST of EY659975 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 38/108 (35.19%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   13 VKEDFNKRYVGGKAASAPANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRTKMWIQNM 336
            VK+ F   Y G +A +A   ++N EF S L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F+     +   M ++N+
Sbjct:   82 VKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNI 187          
BLAST of EY659975 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 37/108 (34.26%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   13 VKEDFNKRYVGGKAASAPANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRTKMWIQNM 336
            +K+ F   Y G +A +A   ++N EF S L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F+     +   M ++N+
Sbjct:   82 IKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187          
BLAST of EY659975 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 37/108 (34.26%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   13 VKEDFNKRYVGGKAASAPANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRTKMWIQNM 336
            +K+ F   Y G +A +A   ++N EF S L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F+     +   M ++N+
Sbjct:   82 IKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187          
BLAST of EY659975 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 37/108 (34.26%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   13 VKEDFNKRYVGGKAASAPANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRTKMWIQNM 336
            +K+ F   Y G +A +A   ++N EF S L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F+     +   M ++N+
Sbjct:   82 IKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187          
The following BLAST results are available for this feature:
BLAST of EY659975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
VA712_ARATH2.246e-1431.16Vesicle-associated membrane protein 712 OS=Arabido... [more]
VAMP7_CHICK3.587e-1237.27Vesicle-associated membrane protein 7 OS=Gallus ga... [more]
VAMP7_RAT7.990e-1234.26Vesicle-associated membrane protein 7 OS=Rattus no... [more]
VAMP7_MOUSE1.044e-1135.19Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_PONAB1.780e-1134.26Vesicle-associated membrane protein 7 OS=Pongo abe... [more]
VAMP7_HUMAN1.780e-1134.26Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
VAMP7_BOVIN1.780e-1134.26Vesicle-associated membrane protein 7 OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659975 ID=EY659975; Name=EY659975; organism=Citrus sinensis; type=EST; length=846bp
TTTCCAGTAAGAGTGAAGGAGGATTTCAACAAGAGATATGTTGGAGGAAA
AGCTGCATCGGCCCCTGCAAATAGCCTGAACAAAGAGTTTGGGTCTAAAC
TAAAGGAGCACATGCAGTATTGTGTGGATCATCCTGAAGAGATCAGCAAG
CTTGCCAAAGTCAAAGCTCAGGTTTCTGAAGTCAAGGGGGTTATGATGGA
AAATATTGAGAAGGTTCTTGATCGTGGTGAGAAGATTGAGCTGCTGGTTG
ACAAAACTGAGAACCTTCGGTCACAGGCACAAGATTTCCGACAACAGGGG
ACGAAGATGAGAACGAAGATGTGGATCCAGAATATGAAGATTAAATTGAT
CGTTTTGGGTATCATCATCGCATTGATCCTTATCATCGTTCTGTCAGTTT
GCCATGGCTTCAAATGTTGATTTGGTCTTGGAAAGTCCCTGGAAACTGTG
CTTTGCTGTCCCGCTGACATGGTCGACTTGGTACATTGGCCACATCTTTT
GATCCTTGCATCTCTCACGCTTGTTTTTGTTTATGTTTTCTTTTTCCCCT
CTTTTAGGTCATCATGCCCTTACTTGCCCCTTGGCAAGGGAATGAATTTG
TATCTTTTCGATTGCTTGTATANGTTATATGCTTGAACTCCCTCGAATAG
ATAAATATCTTATGCTGCCTGCTGNNTGTCTATGCTGCCTGCTGCTTTAT
GTGGATTTTAGTTTAAGATGTAATGGAAACATAAGTGGATACCTGCAGAA
TTGATCATTCCCTTGGCATTGNTATCTGAAATTNATTTCCCATANGAGAT
TAGTCAGAGACAAGNTAGGCGATAAGAAAAAAAAAAAAAAAAAAAA
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