EY659973

Overview
NameEY659973
Unique NameEY659973
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_LISW6 (NADPH dehydrogenase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=namA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 57/182 (31.32%), Postives = 84/182 (46.15%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLI 668
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H+ G     Q+ H GR +    +    + I+  +K                 +P  L  + I  +V DF+ AA  A EAGFD IE+H AHGYLI
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKHLVDGLHSHGAKAGIQLAHAGRKAVLPGEIVAPSAIAYDEKS---------------AKPVELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLI 170          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_BACHD (NADPH dehydrogenase OS=Bacillus halodurans GN=namA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.810e-15
Identity = 53/183 (28.96%), Postives = 86/183 (46.99%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRS--YNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLID 671
            L + Y +  + L +R+V++P+    S   +   +P  I +Y  R   + GL+I EAT V+   +  P   GIW+ + +      V+ +HA G     Q+ H GR +  D                 P I  + +   +   P  +  ++I   +  F+L A  A +AGFD IE+HGAHGYLI+
Sbjct:    5 LFSSYVVKGVTLKNRIVMSPMCMYSSDQKDGKIRPFHISHYESRAAGQVGLIIVEATAVTPQGRISPYDLGIWSDDHISGLTETVERIHAHGAKAAIQLAHAGRKAELD----------------GPIIAPSAISYDKMKTPDAMTEEQISETIEAFKLGALRAKKAGFDIIEIHGAHGYLIN 171          

HSP 2 Score: 21.9422 bits (45), Expect = 2.810e-15
Identity = 10/25 (40.00%), Postives = 13/25 (52.00%), Query Frame = 2
Query:  671 QFMKDQVNDRTDPDGGSLREPVAVL 745
            +F+    N RTD  GGSL     +L
Sbjct:  172 EFLSPLTNKRTDAYGGSLENRYRLL 196          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_GEOSW (NADPH dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=namA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15
Identity = 62/215 (28.84%), Postives = 95/215 (44.19%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTR---QRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLIDNL*RIK*MIEQTQMEDPLENPLPFCLEISEAV 767
            L +PY +  + + +R+V++P+           V   H I Y ++   + GL+I EAT V+   +      GIW+ E V+  + +   V   G     Q+ H GR S  D +    + I  ++K  TP               + +   +I   +  F+  AR A EAGFD IE+HGAHGYLI+          Q +     EN   F  EI +AV
Sbjct:    5 LFSPYTIRGVTIKNRIVMSPMCMYSCDTEDGKVRNWHKIHYPTRAVGQVGLIIVEATAVAAQGRISSRDLGIWSDEHVDGLRELASLVKEHGAKIGIQLAHAGRKSEVDGEIIAPSAIPFSEKTRTP---------------KEMTKADIEETIQAFQNGARRAKEAGFDIIEIHGAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEIIDAV 204          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_CLOAB (NADPH dehydrogenase OS=Clostridium acetobutylicum GN=namA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15
Identity = 59/210 (28.10%), Postives = 94/210 (44.76%), Query Frame = 3
Query:  144 YNMGSLNLSHRVVLAPLTRQRSYN--NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLIDNL*RIK*MIEQTQMEDPLENPLPFCLEISEAV 767
            Y + ++ L +R+V+ P+    S N  N+   H + Y ++     G +I EATG++   +      GIW+++  E    +V  V   G     Q+ H GR     Y+     P++ +        +           P+ L  +EI  I+  F+ AA+ A +AGFD IE+HGAHGYLI+            +     EN   F  E+ EAV
Sbjct:    7 YTIKNMCLKNRIVMPPMCMYSSDNTGNINDFHLVHYTTRSIGGVGFIIVEATGITPNGRISDKDLGIWSEKHAEGLSFLVKEVKKYGSKIAIQLNHSGR----KYEGTSGEPVAPSALAFDENSKT----------PKELTKNEIKEIILAFKAAAKRAEKAGFDAIEIHGAHGYLINQFLSPLSNFRDDEYGGSTENRTRFLKEVLEAV 202          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_LISMH (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=namA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 57/182 (31.32%), Postives = 82/182 (45.05%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLI 668
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR +    +    + I   +K                 +P  L  + I  +V DF+ AA  A EAGFD IE+H AHGYLI
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKRLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIPFDEKS---------------AKPVELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLI 170          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_LISIN (NADPH dehydrogenase OS=Listeria innocua GN=namA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 57/182 (31.32%), Postives = 82/182 (45.05%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLI 668
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR +    +    + I   +K                 +P  L  + I  +V DF+ AA  A EAGFD IE+H AHGYLI
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKRLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIPFDEKS---------------AKPVELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLI 170          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_LISMO (NADPH dehydrogenase OS=Listeria monocytogenes GN=namA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 58/185 (31.35%), Postives = 83/185 (44.86%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLI 668
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +V  +H  G     Q+ H GR   +  +   P+  A    +DKP+                   L  + I  +V DF+ AA  A EAGFD IE+H AHGYLI
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVGGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLI 170          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_BACP2 (NADPH dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=namA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 55/183 (30.05%), Postives = 89/183 (48.63%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRSYNNVP--QP-HAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLID 671
            L +P+ +  + L +R+V++P+    SY+     QP H   Y S+   + GL++ EA+ VS   +      GIW+ E +E +  + + + A G     Q+ H GR +  D      + I   ++  TP                ++  D+I   V  F+ AA  A +AGFD IE+HGAHGYLI+
Sbjct:    5 LFSPWTLKGVTLKNRIVMSPMCMYSSYDRDGKLQPFHFTHYISRAQGQAGLIMVEASAVSPEGRISDQDLGIWSDEHIEGFASLNEQIKAYGTKTAIQLAHAGRKAELDGDILAPSSIPFDEQSKTPV---------------QMSVDQIKDTVQAFQDAAVRAKKAGFDIIEIHGAHGYLIN 172          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_BACSU (NADPH dehydrogenase OS=Bacillus subtilis GN=namA PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 3.397e-14
Identity = 50/182 (27.47%), Postives = 85/182 (46.70%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLI 668
            L TP  +  + L +R+V++P+    S+     +   H   Y S+   + GL+I EA+ V+   +      GIW+ E +E +  + + V  +G     Q+ H GR +  +      + I+  ++  TP                 +  +++   V +F+ AA  A EAGFD IE+H AHGYLI
Sbjct:    5 LFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPV---------------EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLI 171          
BLAST of EY659973 vs. ExPASy Swiss-Prot
Match: NAMA_GEOKA (NADPH dehydrogenase OS=Geobacillus kaustophilus GN=namA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.794e-14
Identity = 61/215 (28.37%), Postives = 92/215 (42.79%), Query Frame = 3
Query:  132 LLTPYNMGSLNLSHRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGTFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTRPRRLRTDEIPXIVNDFRLAARNAIEAGFDGIELHGAHGYLIDNL*RIK*MIEQTQMEDPLENPLPFCLEISEAV 767
            L +PY +  L L +R+V++P+           V   H I Y ++   + GL+I EATGV+   +      GIW+ + +   + +V  V   G     Q+ H GR S    +    + +   D   TP               + +   +I   V  F+  AR A EAGFD IE+H AHGYLI+          Q +     EN   F  E+ +AV
Sbjct:    5 LFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTP---------------KEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAV 204          
The following BLAST results are available for this feature:
BLAST of EY659973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
NAMA_LISW62.352e-1531.32NADPH dehydrogenase OS=Listeria welshimeri serovar... [more]
NAMA_BACHD2.810e-1528.96NADPH dehydrogenase OS=Bacillus halodurans GN=namA... [more]
NAMA_GEOSW3.072e-1528.84NADPH dehydrogenase OS=Geobacillus sp. (strain WCH... [more]
NAMA_CLOAB3.072e-1528.10NADPH dehydrogenase OS=Clostridium acetobutylicum ... [more]
NAMA_LISMH8.939e-1531.32NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]
NAMA_LISIN8.939e-1531.32NADPH dehydrogenase OS=Listeria innocua GN=namA PE... [more]
NAMA_LISMO1.167e-1431.35NADPH dehydrogenase OS=Listeria monocytogenes GN=n... [more]
NAMA_BACP21.167e-1430.05NADPH dehydrogenase OS=Bacillus pumilus (strain SA... [more]
NAMA_BACSU3.397e-1427.47NADPH dehydrogenase OS=Bacillus subtilis GN=namA P... [more]
NAMA_GEOKA5.794e-1428.37NADPH dehydrogenase OS=Geobacillus kaustophilus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659973 ID=EY659973; Name=EY659973; organism=Citrus sinensis; type=EST; length=934bp
CATCATCAGAGGCGTCCGGGATTCTCATTCCTATAAAAAGTGTACTAAAC
ATGGGAAGCAGAGCAGAGGAGACTAAGCAAAATCTTGAACCCAACAACGG
TAACATGGCCATTGAAACTCCCATCATCCCTCTTCTCACTCCTTACAATA
TGGGCAGTCTCAATCTTTCTCATAGAGTTGTTTTGGCACCACTGACTAGA
CAGAGATCATACAACAATGTTCCTCAGCCACATGCCATTTTGTATTACTC
TCAAAGAACCACCAAAGGGGGTTTGCTTATAGCCGAAGCCACTGGAGTTT
CCGACACTGCTCAAGGGTATCCAGATACGCCTGGTATCTGGACAAAGGAG
CAAGTTGAAGCATGGAAACCAATTGTAGATGCTGTTCATGCCAAAGGTGG
GACCTTCTTTTGTCAGATTTGGCACGTTGGCAGGGTTTCAAATCAAGATT
ATCAGCCAAATGGTCAAGCTCCAATTTCCAGTACAGACAAGCCATTGACA
CCTCAAATCCGCGCTAATGGTGTTGATATTGCACAATTCACTCGTCCAAG
GCGGCTAAGGACAGATGAAATCCCTNCAATTGTGAATGATTTCAGGCTTG
CTGCAAGAAACGCAATTGAGGCTGGTTTCGATGGCATTGAGCTCCACGGT
GCACATGGCTACCTAATTGACAATTTATGAAGGATCAAGTGAATGATCGA
ACAGACCCAGATGGAGGATCCCTTAGAGAACCCGTTGCCGTTTTGTTTAG
AAATTAGTGAAGCTGTTTCCAATGAAATACGGGCAAATAGGGTTGGGATA
AGATATCTCCGTTTGCAAACTTATGGAATCAGGAGACTCTACCCCAGAGC
TTTAGGTCTTTCATGGAGGAACCTTGAACAAAATGGGATCCCTATTGCCC
ATGGTTGAACCGAGGAGGAAAACCGTGGAAAAAA
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