EY659962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 348.977 bits (894), Expect = 2.236e-95 Identity = 183/256 (71.48%), Postives = 202/256 (78.91%), Query Frame = 1 Query: 85 STMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 +TMALSS + GKA ++ GRI+MRK+ +K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGA EGYRIAGGPLGEV DPLYP GSFDPLGLADDPEAFAEL+ E + + + G+F+++ + LAD A+P NN W Sbjct: 4 ATMALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA--IVTGKGPLENLADHLADPVNNNAW 251
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 2.921e-95 Identity = 177/253 (69.96%), Postives = 199/253 (78.66%), Query Frame = 1 Query: 115 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 G+ +L P N+L G R++MRK +K ++ S SPWYG DRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGA EGYRIAGGPLGEVTDP+YP GSFDPLGLA+DPEAFAEL+ E + + + G+F+++ + LAD A+P NN W Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQA--IVTGKGPIENLADHLADPVNNNAW 264
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 9.396e-94 Identity = 175/248 (70.56%), Postives = 198/248 (79.84%), Query Frame = 1 Query: 127 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 ++ P N+L G R++MRK TG KSV++ SPWYG DRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA EGYR+AGGPLGEVTDP+YP G+FDPLGLADDP+AFAEL+ E + + + G+F+++ + LAD A+P NN W Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQA--IVTGKGPIENLADHLADPVNNNAW 268
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 4.663e-93 Identity = 173/248 (69.76%), Postives = 198/248 (79.84%), Query Frame = 1 Query: 127 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 ++ P N+L G R++MRK TG KSV++ SPWYG DRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA EGYR+AGGPLGEVTDP+YP G+FDPLGLADDP+AFA+++ E + + + G+F+++ + LAD A+P NN W Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQA--IVTGKGPIENLADHLADPVNNNAW 268
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 6.090e-93 Identity = 183/254 (72.05%), Postives = 200/254 (78.74%), Query Frame = 1 Query: 85 STMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 STMALSSS G+A+ LAPS EL G R+SMRKT K+VSSGSPWYG DRVKYLGPFSGE PSYLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGA EGYRIAGGPLGEVTDP+YP GSFDPLGLADDPEA AEL+ E + + + G+F+++ + LAD A+P NN W Sbjct: 4 STMALSSSSLAGQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQA--IVTGKGPLENLADHLADPVNNNAW 246
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 319.316 bits (817), Expect = 1.276e-91 Identity = 150/184 (81.52%), Postives = 165/184 (89.67%), Query Frame = 1 Query: 160 GGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 GGR+SMR+T + +S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG EGYR+ GGPLGE DP+YP G+FDPLGLADDP+AFAEL+ E Sbjct: 32 GGRVSMRRTVKSAPTS--IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKE 213 HSP 2 Score: 39.6614 bits (91), Expect = 1.276e-91 Identity = 21/48 (43.75%), Postives = 25/48 (52.08%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G + L+ L +A NF PGK Sbjct: 218 RLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 6.302e-90 Identity = 172/259 (66.41%), Postives = 197/259 (76.06%), Query Frame = 1 Query: 82 TSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE--SEWKGCYXLHGWFLRSGHWHPARDR*RTLADTWAEPGNNMPW 837 TST AL+S+F G+ + NELS R+ M SK+ SGS WYG DR YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGA EGYR+AGGPLGEV DP+YP GSFDPLGLADDPEAFAEL+ E + + + G+F+++ + L+D A+P N W Sbjct: 3 TSTAALTSTFSGQQLKPV---NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQA--IVTGKGPIENLSDHLADPAVNNAW 255
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 6.881e-90 Identity = 156/209 (74.64%), Postives = 173/209 (82.78%), Query Frame = 1 Query: 103 SSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 S+FVG+AV S NE GRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG EGYR+ GGPLGE D +YP G+FDPLGLADDPEAFAEL+ E Sbjct: 9 SAFVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKE 213 HSP 2 Score: 37.3502 bits (85), Expect = 6.881e-90 Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G + L + +A NF PGK Sbjct: 218 RLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 8.975e-90 Identity = 158/215 (73.49%), Postives = 178/215 (82.79%), Query Frame = 1 Query: 85 STMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 +T S++ G++ L NELS R++MR+T SKS S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA EGYR+AGGPLGEVTDP+YP GSFDPLGLADDP+ FAEL+ E Sbjct: 4 ATAMHSTALAGQS--LVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKE 216 HSP 2 Score: 29.6462 bits (65), Expect = 8.975e-90 Identity = 18/47 (38.30%), Postives = 21/47 (44.68%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPG 862 R AM SM GFF QAI T +G + L L +A PG Sbjct: 221 RLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
BLAST of EY659962 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 3.391e-89 Identity = 154/209 (73.68%), Postives = 171/209 (81.82%), Query Frame = 1 Query: 103 SSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAXEGYRIAGGPLGEVTDPLYPXGSFDPLGLADDPEAFAELRFXE 711 S+F G+ S NEL NGGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILA+WA QVVLMG EGYR+ GGPLGE D +YP G+FDPLGLADDPEAFAEL+ E Sbjct: 9 SAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKE 213 HSP 2 Score: 38.5058 bits (88), Expect = 3.391e-89 Identity = 20/48 (41.67%), Postives = 25/48 (52.08%), Query Frame = 2 Query: 722 RXAMXSMVGFFXQAIGTRQGTVRGLWPTLGPSLATTCLGLPHNFXPGK 865 R AM SM GFF QAI T +G + L+ + +A NF PGK Sbjct: 218 RLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265 The following BLAST results are available for this feature:
BLAST of EY659962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659962 ID=EY659962; Name=EY659962; organism=Citrus sinensis; type=EST; length=911bpback to top |