EY659950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 426.017 bits (1094), Expect = 1.278e-118 Identity = 209/234 (89.32%), Postives = 216/234 (92.31%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWISGIXV 739 IAPAFMDKL+VH+ N M+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGAL RVYDD VR W+ I V Sbjct: 121 IAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGV 353
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 423.32 bits (1087), Expect = 8.283e-118 Identity = 206/234 (88.03%), Postives = 215/234 (91.88%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWISGIXV 739 IAPAFMDKLVVHIT N ++LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGAL RVYDD VR ++ + V Sbjct: 133 IAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGV 366
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 422.165 bits (1084), Expect = 1.845e-117 Identity = 205/234 (87.61%), Postives = 216/234 (92.31%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWISGIXV 739 IAPAF+DKLVVHI N M+LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V + DIV+LVD PGQSIDFFGAL RVYDD VR WISG+ V Sbjct: 137 IAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGV 370
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 418.313 bits (1074), Expect = 2.665e-116 Identity = 202/230 (87.83%), Postives = 214/230 (93.04%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWIS 727 IA FMDKLVVH++ N M+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+I+KGKM CL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V ++ +V+LVDTFPGQSIDFFGAL RVYDD VR W+S Sbjct: 129 IAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVS 358
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 410.609 bits (1054), Expect = 5.556e-114 Identity = 197/234 (84.19%), Postives = 212/234 (90.60%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWISGIXV 739 IAPAFMDKLVVHIT N ++LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC L INDL+ GAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIF+ D V + +VKLVD FPGQSIDFFGAL RVY D VR W++ + V Sbjct: 131 IAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGV 364
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 2.340e-104 Identity = 182/234 (77.78%), Postives = 200/234 (85.47%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWISGIXV 739 I+PAF+DK+ +HI N M LP IKVPLILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DII+KG+MC L INDLDAGAGRMG TTQYTVNNQMVNATLMNIADNPT VQLPG+Y EE PRVPI+ TGNDFSTLYAPLIRDGRMEK+YW PTREDRIGVC GIF+ DNV ++ LVDTFPGQSIDFFGAL RVYDD VR WI+ V Sbjct: 106 ISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGV 339
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 5.419e-85 Identity = 158/265 (59.62%), Postives = 195/265 (73.58%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWISGIXVXXXXXXXXXXXXXPHSSTKDD--MXELLES 823 IAP F+DKL VHIT N ++LP ++VPLILGI G KG+GK+FQCEL F KMG+ ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R++++G+ GIF D ++ D+ KLVD+FP QSIDFF AL R+YD+ +R++I + P + K D + L+ES Sbjct: 5 IAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIES 269
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.059e-84 Identity = 153/230 (66.52%), Postives = 184/230 (80.00%), Query Frame = 2 Query: 38 IAPAFMDKLVVHITNNPMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALXXRVYDDXVRNWI 724 IAP F+DKL VHIT N +++P ++VPLILGI G KG+GK+FQCEL F KMGI ++S GELES +AG+PA+LIR RYRE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R+D++G+ GIF D ++ +I +LVDTFP QSIDFF AL R+YD +R++I Sbjct: 5 IAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFI 234
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.497e-30 Identity = 91/194 (46.91%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 104 IKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGAL 685 ++VPLILGIWGGK MGINPIMMSAGELESGNAGEPA KMCCL INDLDAGAG RVPIIVTGNDFSTLYAPLI RIGVC GIFR LVDTFPGQSIDFFGAL Sbjct: 45 LRVPLILGIWGGK--------------MGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAG-----------------------------------------RVPIIVTGNDFSTLYAPLI----------------RIGVCTGIFR-----------LVDTFPGQSIDFFGAL 139
BLAST of EY659950 vs. ExPASy Swiss-Prot
Match: RCA_VITSX (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12 Identity = 39/61 (63.93%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 182 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTT 364 +MGINPIMMSAGELESGNAGEPA KMCCL INDLDAGAGR+G T Sbjct: 15 RMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRIGVCT 58 The following BLAST results are available for this feature:
BLAST of EY659950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659950 ID=EY659950; Name=EY659950; organism=Citrus sinensis; type=EST; length=847bpback to top |