EY659941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.657e-84 Identity = 166/252 (65.87%), Postives = 189/252 (75.00%), Query Frame = 2 Query: 59 TSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLRNQEWKVG-------YVLHVWVLRSGHCHRQGPLENFGD 778 T++ SSS G+ + L P NEL + RI+MR+T + S WYG DR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAGAQIFSEGGLDY GNP+LIHAQSILAIWACQVVLMG +EGYR+ GG LGE DPL PGG+FDPLGLADDPEA AEL+++ E K G + V + +G +GP+EN D Sbjct: 3 TASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVK--EIKNGRLAMFSMFGFFVQAIVTG----KGPIENLYD 245
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 1.029e-81 Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 2 Query: 155 RKTGSKSV---SSGSPWYGLDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLR 685 +KT +K+ SSG +YG +R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAEL+++ Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 200 HSP 2 Score: 54.299 bits (129), Expect = 1.029e-81 Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTGKDR*RTLAT-LGRPCQTHAWAYATTFVP 833 IKNGRLA FSMFGFF QAIVTGK + L L P +A+A+AT F P Sbjct: 202 IKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.756e-73 Identity = 154/250 (61.60%), Postives = 174/250 (69.60%), Query Frame = 2 Query: 89 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLRN-QEWKVGYVLHVWVLRSGHCHRQGPLENFGD-TWXTLSNTCLGLRHHFCP 832 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIW +V+LMGAVEGYRIA GPLGEVTDPLYP GSFD LGLA+D EAFAEL+++ + ++ R+ LEN D T++N L +F P Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTCDR--RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVP 266
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.746e-71 Identity = 137/208 (65.87%), Postives = 159/208 (76.44%), Query Frame = 2 Query: 179 SSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLRNQEWKVG-------YVLHVWVLRSGHCHRQGPLENFGD 778 S+G WYG DR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG+P+LIHAQ+I+A A QVVLMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAEL+++ E K G + V + +G +GP++N D Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK--EIKNGRLAMFSCFGFFVQAIVTG----KGPIQNLAD 235
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 2.958e-69 Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 2 Query: 194 WYGLDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPEAFAELRLR 685 +YG DR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLGN SLIHAQSI+A A QVVLMG E YR GG G + D LYPGG FDPLGLADDP+ FAEL+++ Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVK 200 HSP 2 Score: 49.2914 bits (116), Expect = 2.958e-69 Identity = 29/50 (58.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTGKDR*RTLAT-LGRPCQTHAWAYATTFVP 833 IKNGRLAMFS GFF QAIVTGK + L L P A+A AT F P Sbjct: 202 IKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTP 251
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.575e-67 Identity = 143/250 (57.20%), Postives = 173/250 (69.20%), Query Frame = 2 Query: 59 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELRLRNQEWKVG-------YVLHVWVLRSGHCHRQGPLENFGD 778 ++T+ ++ F+G+ N P + ++ G ++ S WYG DRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLADDP FAEL+++ E K G + V + +G +GPLEN D Sbjct: 10 STTVVKATPFLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVK--EIKNGRLAMFSMFGFFVQAIVTG----KGPLENLLD 244
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 2.498e-66 Identity = 145/251 (57.77%), Postives = 171/251 (68.13%), Query Frame = 2 Query: 59 TSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELRLRNQEWKVG-------YVLHVWVLRSGHCHRQGPLENFGD 778 T A S + V K L+ G S + + ++ G+ WYG DRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G +GE D LYPGG FDPLGLADDP FAEL+++ E K G + V + +G +GPLEN D Sbjct: 4 TIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVK--EIKNGRLAMFSMFGFFVQAIVTG----KGPLENLFD 247
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.468e-58 Identity = 121/210 (57.62%), Postives = 147/210 (70.00%), Query Frame = 2 Query: 158 KTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLRN-QEWKVGYVLHVWVLRSGHCHRQGPLENFGD 778 K SKS SS + +YG D + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+A +WFKAGA IF +GGL+YLGNPSLIHAQ+I+A A QVVLMG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAEL+++ + ++ + +GP+EN D Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTD 253
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.334e-43 Identity = 92/135 (68.15%), Postives = 105/135 (77.78%), Query Frame = 2 Query: 395 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLRNQEWKVG-------YVLHVWVLRSGHCHRQGPLENFGD 778 ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLYPG +FDPLGLADDPEA AEL+++ E K G + V + +G +GP+EN D Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVK--EIKNGRLAMFSMFGFFVQAIVTG----KGPIENLYD 129
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.807e-32 Identity = 90/210 (42.86%), Postives = 115/210 (54.76%), Query Frame = 2 Query: 167 SKSVSSGSP----WYGLDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLRN-QEWKVGYVLHVWVLRSGHCHRQGPLEN 769 SK+VS S WYG DR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I +LA+ A +VVL+G E YRI G + D L+PGG FDPLGLA DPE A L+++ + ++ + + +GP+EN Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVEN 253 The following BLAST results are available for this feature:
BLAST of EY659941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659941 ID=EY659941; Name=EY659941; organism=Citrus sinensis; type=EST; length=843bpback to top |