EY659941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.316e-18 Identity = 60/149 (40.27%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 242 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL---GEVTDPLYPGGSFDPLGLADDPEAFAELR 679 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL G WF QI+ + +D+ + A+ A QVV +E +R GG L E D YPG FDPL L + AE++ Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL-------GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTEYTKEAEIK 501 HSP 2 Score: 32.3426 bits (72), Expect = 2.316e-18 Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTGK 755 IKNGRLAM MFG Q+ VTGK Sbjct: 500 IKNGRLAMNGMFGLEVQSHVTGK 522 HSP 3 Score: 79.337 bits (194), Expect = 9.659e-16 Identity = 54/152 (35.53%), Postives = 74/152 (48.68%), Query Frame = 2 Query: 233 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG---PLGEVTDPLYPGGSFDPLGLADDPEAFAELR 679 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL G+ WF+AG + L + + + E +R GG GE+ D YPG FDPL L D AE++ Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQKGEL-DRSYPG--FDPLNLTTDYTRAAEVK 316 HSP 4 Score: 25.0238 bits (53), Expect = 9.659e-16 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTGK 755 +KNGRLA+ ++ G Q + TG+ Sbjct: 315 VKNGRLALTAVAGLTAQYLATGE 337 HSP 5 Score: 70.0922 bits (170), Expect = 1.815e-13 Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 245 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-YRIAGGPLGEVTDP--LYPGGSFDPLGLADDPEAFAELR 679 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L G+ +W++A I +V + A G + +A G + E +DP +YPG FDPL L D AE++ Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL-------GKGIWYEAAQN---------------------AGIGLKEVAIFTAAYGVFEVARG-VKENSDPTTIYPG--FDPLNLTTDYTKEAEIK 128 HSP 6 Score: 26.5646 bits (57), Expect = 1.815e-13 Identity = 20/52 (38.46%), Postives = 24/52 (46.15%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTGKDR*RTLAT-LGRPCQ-------THAWAYA 818 IKNGRLA+ ++ GF Q V G LA L +P Q H W A Sbjct: 127 IKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRNIADSIMHQWPVA 178
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18 Identity = 80/253 (31.62%), Postives = 114/253 (45.06%), Query Frame = 2 Query: 53 NGTSTMALSSSFVGKAVNLAPSGNELSNGGRISMRK----TGSKSVSSGSPWYGLDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELRLRNQEWKVGYVLHVWVLRSGHCH---RQGPLEN 769 NG+ A +SF+G G R+ + K GS+SV+ + DR + F G PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q + + +L + +L WA ++ G V I TD YPGG FDPLG A + LR +E K G + + V+ + H GP++N Sbjct: 23 NGSIVGATKASFLG--------------GKRLRVSKFIAPVGSRSVAVSAVAADPDRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQEY------FTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIK-ELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 250
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.444e-16 Identity = 73/236 (30.93%), Postives = 105/236 (44.49%), Query Frame = 2 Query: 62 STMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSV---SSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELRLR 685 +T AL SS +++ + G RIS T S ++ +P + L S + SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + PE+L + G+ E WF+ G I G +Y + ++ ++ LMG E R LG DP YPGG F+PLG D ++ EL+L+ Sbjct: 2 ATQALISS---SSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLK 224 HSP 2 Score: 35.8094 bits (81), Expect = 3.444e-16 Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTG 752 IKNGRLAM ++ G+F QA+VTG Sbjct: 226 IKNGRLAMLAILGYFIQALVTG 247
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.830e-16 Identity = 79/243 (32.51%), Postives = 110/243 (45.27%), Query Frame = 2 Query: 62 STMALSSS----FVGKAVNLA------PSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGE------------VTDPLYPGGS-FDPLGLADDPEAFAELRLR 685 +T AL SS F +AV + PS S G + R + V G G+DR + S + SYL G PGDYG+D GLS DPE F + R L EVI+ R+AMLGA+G + PE L + G+ E WF+ G I G +Y + ++ ++ LMG E R G +G+ +P YPGG F+PLG D ++ EL+L+ Sbjct: 2 ATQALVSSSSLTFAAEAVRQSFRARSLPSSVGCSRKGLV--RAAATPPVKQG----GVDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLK 226 HSP 2 Score: 33.8834 bits (76), Expect = 9.830e-16 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTG 752 +KNGRLAM ++ G+F Q +VTG Sbjct: 228 VKNGRLAMLAILGYFIQGLVTG 249
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.515e-14 Identity = 50/144 (34.72%), Postives = 69/144 (47.92%), Query Frame = 2 Query: 245 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPLGEVTDPLYPGGSFDPLGLADDPEA 664 P YLTG PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ G+ W+ AG + F+ ++ L H I W + G+V ++ P GEV YPGG F+PL A EA Sbjct: 63 PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI-INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPAGEVG---YPGGIFNPLNFAPTLEA 200 HSP 2 Score: 29.6462 bits (65), Expect = 6.515e-14 Identity = 14/23 (60.87%), Postives = 15/23 (65.22%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTGK 755 I NGRLAM + GF Q VTGK Sbjct: 205 IANGRLAMLAFLGFIIQHNVTGK 227
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.262e-12 Identity = 62/193 (32.12%), Postives = 77/193 (39.90%), Query Frame = 2 Query: 242 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN--------------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---LYPGGSFDPLGLADDPEAFAELRL 682 PP +L G GD G+D GL E AKN RE E+IH RWAMLG LG + E L G+ W AG EG YLG P +++ I +V+++G +E R DP +YPGG FDPLGLA DPE L+L Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALT--GI-----AWQDAGKVELVEGS-SYLGQPLPFSLTTLIWI---EVLVVGYIEFQR------NSELDPEKRIYPGGYFDPLGLAADPEKLDTLKL 240 HSP 2 Score: 25.0238 bits (53), Expect = 4.262e-12 Identity = 15/31 (48.39%), Postives = 17/31 (54.84%), Query Frame = 3 Query: 687 IKNGRLAMFSMFGFFXQAIVTGKDR*RTLAT 779 IK+ RLAM + F QA TGK LAT Sbjct: 243 IKHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273
BLAST of EY659941 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11 Identity = 59/188 (31.38%), Postives = 85/188 (45.21%), Query Frame = 2 Query: 245 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELRLRNQEWKVGYVLHVWVLRSGHCHRQGPLEN----FGDTW 784 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ W+ AG Q F+ ++ L H I W + G+V ++ P GEV YPGG F+PL A EA E L N ++ + + + + +GP EN D W Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPKGEVG---YPGGIFNPLNFAPTQEA-KEKELAN--GRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPW 242 The following BLAST results are available for this feature:
BLAST of EY659941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659941 ID=EY659941; Name=EY659941; organism=Citrus sinensis; type=EST; length=843bpback to top |