EY659938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESM (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.124e-20 Identity = 83/266 (31.20%), Postives = 126/266 (47.37%), Query Frame = 3 Query: 126 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGD-----NMIEKSTNLDWYRVQPCWMLXDIS*AEEPSDSPFV-------CTSGRVQIVALEPSSGRVETGV 875 H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GV +I NK D A E+V+ EV L + + + +P + + EG+ +IE + LD Y +P E D PF+ SGR +V +GRVE G+ Sbjct: 12 HVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVPFIIVFMNKCDMV----DDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALEGEPEWEAKIIELAEALDSYIPEP----------ERDIDKPFLMPIEDVFSISGRGTVV-----TGRVERGI 236
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEON (Elongation factor Tu 1 OS=Shewanella oneidensis GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.124e-20 Identity = 82/266 (30.83%), Postives = 126/266 (47.37%), Query Frame = 3 Query: 126 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGD-----NMIEKSTNLDWYRVQPCWMLXDIS*AEEPSDSPFV-------CTSGRVQIVALEPSSGRVETGV 875 H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GV +I NK D A E+V+ EV L + + + +P + + EG+ ++E + LD Y +P E D PF+ SGR +V +GRVE G+ Sbjct: 12 HVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVPFIIVFMNKCDMV----DDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALEGEPEWEAKILELAAALDSYIPEP----------ERDIDKPFLMPIEDVFSISGRGTVV-----TGRVERGI 236
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_STRU0 (Elongation factor Tu OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 70/200 (35.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 126 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIE 716 H+NI IGHVD GK+T T + V+ R + K YA + D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E Sbjct: 12 HVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_RECAM (Elongation factor Tu, mitochondrial OS=Reclinomonas americana GN=TUFA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 79/259 (30.50%), Postives = 117/259 (45.17%), Query Frame = 3 Query: 126 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIEKS-----TNLDWYRVQPCWMLXDIS*AEEPSDSPFVCTSGRVQIVALEPS--SGRVETG 872 H NI IGHVD GK+T T + L V +++ +DK E++RGITI + ++ETTK + ID PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK+D D + EV L Y +++P + + +G+ +KS +D Y QP E D PF+ V +A + +GRVE G Sbjct: 12 HCNIGTIGHVDHGKTTLTAAITKVLSETGGAVFTDYDQ---------------IDKAPEEKKRGITISTSHVEYETTKRHYAHIDCPGHEDYVKNMITGAAQMDGAILVVSAVDGPMP-------QTREHILLSRQVGVPSLVVFLNKVDMVN---DPEMLDLVEMEVRELLLSYKYPGDEIPIIRGSALKALQGEIEYKKSILKLMEAVDNYIPQP----------ERSFDRPFLMPVEDVFSIAGRGTVVTGRVEQG 235
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_OCHA4 (Elongation factor Tu OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 82/258 (31.78%), Postives = 113/258 (43.80%), Query Frame = 3 Query: 126 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKSTNLDWYRVQPCWMLXDIS*AEEPSDSPFV-------CTSGRVQIVALEPSSGRVETGV 875 H+NI IGHVD GK++ T + G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + A E+V+ EV L K + ++VP + S K D R + I E P D PF+ SGR +V +GRVE G+ Sbjct: 12 HVNIGTIGHVDHGKTSLTAAITKFFG--------------------EFKAYDQIDAAPEERARGITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYDFPGDEVPIIKGSALAALEDSSKELGEDAVRSLMAAVDDYIPTPERPIDQPFLMPIEDVFSISGRGTVV-----TGRVERGI 233
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_NOCFA (Elongation factor Tu OS=Nocardia farcinica GN=tuf PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 73/202 (36.14%), Postives = 108/202 (53.47%), Query Frame = 3 Query: 126 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIEKS 722 H+NI IGHVD GK+T T I K + +++ ++N+ SF + + DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ E+ P V +SG EGD KS Sbjct: 12 HVNIGTIGHVDHGKTTLTA-------AITKVLADKYP----DLNQ-SFAFDQI-DKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEEILELVEMEVRELLAAQEFD-EEAPVVRVSGLKALEGDPKWVKS 189
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_LACPL (Elongation factor Tu OS=Lactobacillus plantarum GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 72/203 (35.47%), Postives = 100/203 (49.26%), Query Frame = 3 Query: 126 HINIVVIGHVDSGKSTTTGHLIYKLG--GIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIEK 719 H+NI IGHVD GK+T T + L G+ K E++ A +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + +P + + EGD EK Sbjct: 12 HVNIGTIGHVDHGKTTLTAAITKVLASKGLAK------EQDFAS-----------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDFPGDDIPVIRGSALKALEGDPEQEK 187
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_COXBU (Elongation factor Tu OS=Coxiella burnetii GN=tufA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 82/271 (30.26%), Postives = 122/271 (45.02%), Query Frame = 3 Query: 114 KETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-------NMIEKSTNLDWYRVQPCWMLXDIS*AEEPSDSPFV-------CTSGRVQIVALEPSSGRVETGV 875 +E H+N+ IGHVD GK+T T L L EK E K++F +D ER RGITI + ++++ K + +D PGH D++KNMITG +Q D A+L++ + G QTREH +LA +GV ++ NK D K + + EV L + ++ P + + EGD ++I+ +D Y QP E D PF+ SGR +V +GRVE G+ Sbjct: 8 REKPHVNVGTIGHVDHGKTTLTAALTKVLS----------EKYGGE--KKAFDQ---IDNAPEERARGITIATSHVEYQSDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHIVLAKQVGVPNIVVYLNKADMVD---DKELLELVEMEVRDLLNSYDFPGDETPIIVGSALKALEGDKSEVGEPSIIKLVETMDTYFPQP----------ERAIDKPFLMPIEDVFSISGRGTVV-----TGRVERGI 238
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_COXBR (Elongation factor Tu OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 82/271 (30.26%), Postives = 122/271 (45.02%), Query Frame = 3 Query: 114 KETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-------NMIEKSTNLDWYRVQPCWMLXDIS*AEEPSDSPFV-------CTSGRVQIVALEPSSGRVETGV 875 +E H+N+ IGHVD GK+T T L L EK E K++F +D ER RGITI + ++++ K + +D PGH D++KNMITG +Q D A+L++ + G QTREH +LA +GV ++ NK D K + + EV L + ++ P + + EGD ++I+ +D Y QP E D PF+ SGR +V +GRVE G+ Sbjct: 8 REKPHVNVGTIGHVDHGKTTLTAALTKVLS----------EKYGGE--KKAFDQ---IDNAPEERARGITIATSHVEYQSDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHIVLAKQVGVPNIVVYLNKADMVD---DKELLELVEMEVRDLLNSYDFPGDETPIIVGSALKALEGDKSEVGEPSIIKLVETMDTYFPQP----------ERAIDKPFLMPIEDVFSISGRGTVV-----TGRVERGI 238
BLAST of EY659938 vs. ExPASy Swiss-Prot
Match: EFTU_COXBN (Elongation factor Tu OS=Coxiella burnetii (strain Dugway 5J108-111) GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.468e-20 Identity = 82/271 (30.26%), Postives = 122/271 (45.02%), Query Frame = 3 Query: 114 KETTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-------NMIEKSTNLDWYRVQPCWMLXDIS*AEEPSDSPFV-------CTSGRVQIVALEPSSGRVETGV 875 +E H+N+ IGHVD GK+T T L L EK E K++F +D ER RGITI + ++++ K + +D PGH D++KNMITG +Q D A+L++ + G QTREH +LA +GV ++ NK D K + + EV L + ++ P + + EGD ++I+ +D Y QP E D PF+ SGR +V +GRVE G+ Sbjct: 8 REKPHVNVGTIGHVDHGKTTLTAALTKVLS----------EKYGGE--KKAFDQ---IDNAPEERARGITIATSHVEYQSDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHIVLAKQVGVPNIVVYLNKADMVD---DKELLELVEMEVRDLLNSYDFPGDETPIIVGSALKALEGDKSEVGEPSIIKLVETMDTYFPQP----------ERAIDKPFLMPIEDVFSISGRGTVV-----TGRVERGI 238 The following BLAST results are available for this feature:
BLAST of EY659938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659938 ID=EY659938; Name=EY659938; organism=Citrus sinensis; type=EST; length=952bpback to top |